3fg8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:08, 30 October 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3fg8' size='340' side='right'caption='[[3fg8]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='3fg8' size='340' side='right'caption='[[3fg8]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3fg8]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhojr Rhojr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FG8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FG8 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3fg8]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodococcus_jostii_RHA1 Rhodococcus jostii RHA1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FG8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FG8 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3PB:(3R)-3-(PHOSPHONOOXY)BUTANOIC+ACID'>3PB</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3PB:(3R)-3-(PHOSPHONOOXY)BUTANOIC+ACID'>3PB</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RHA1_ro04714 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=101510 RHOJR])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fg8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fg8 OCA], [https://pdbe.org/3fg8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fg8 RCSB], [https://www.ebi.ac.uk/pdbsum/3fg8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fg8 ProSAT], [https://www.topsan.org/Proteins/MCSG/3fg8 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fg8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fg8 OCA], [https://pdbe.org/3fg8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fg8 RCSB], [https://www.ebi.ac.uk/pdbsum/3fg8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fg8 ProSAT], [https://www.topsan.org/Proteins/MCSG/3fg8 TOPSAN]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q0S7I6_RHOJR Q0S7I6_RHOJR]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 14: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fg/3fg8_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fg/3fg8_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 22: Line 23:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Rhojr]]
+
[[Category: Rhodococcus jostii RHA1]]
-
[[Category: Chang, C]]
+
[[Category: Chang C]]
-
[[Category: Cui, H]]
+
[[Category: Cui H]]
-
[[Category: Edwards, A]]
+
[[Category: Edwards A]]
-
[[Category: Joachimiak, A]]
+
[[Category: Joachimiak A]]
-
[[Category: Structural genomic]]
+
[[Category: Savchenko A]]
-
[[Category: Savchenko, A]]
+
[[Category: Xu X]]
-
[[Category: Xu, X]]
+
-
[[Category: Mcsg]]
+
-
[[Category: Pas domain]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Uncharacterized protein]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal structure of PAS domain of RHA05790

PDB ID 3fg8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools