7owx
From Proteopedia
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==Structure of coiled-coil tetramer from SARS-CoV-2 spike stalk region== | ==Structure of coiled-coil tetramer from SARS-CoV-2 spike stalk region== | ||
| - | <StructureSection load='7owx' size='340' side='right'caption='[[7owx]]' scene=''> | + | <StructureSection load='7owx' size='340' side='right'caption='[[7owx]], [[Resolution|resolution]] 1.93Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7OWX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7OWX FirstGlance]. <br> | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7OWX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7OWX FirstGlance]. <br> | ||
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7owx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7owx OCA], [https://pdbe.org/7owx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7owx RCSB], [https://www.ebi.ac.uk/pdbsum/7owx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7owx ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.929Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7owx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7owx OCA], [https://pdbe.org/7owx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7owx RCSB], [https://www.ebi.ac.uk/pdbsum/7owx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7owx ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Spike trimer plays a key role in SARS-CoV-2 infection and vaccine development. It consists of a globular head and a flexible stalk domain that anchors the protein into the viral membrane. While the head domain has been extensively studied, the properties of the adjoining stalk are poorly understood. Here, we characterize the coiled-coil formation and thermodynamic stability of the stalk domain and its segments. We find that the N-terminal segment of the stalk does not form coiled-coils and remains disordered in solution. The C-terminal stalk segment forms a trimeric coiled-coil in solution, which becomes significantly stabilized in the context of the full-length stalk. Its crystal structure reveals a novel antiparallel tetramer coiled-coil with an unusual combination of a-d and e-a-d hydrophobic core packing. Structural analysis shows that a subset of hydrophobic residues stabilizes different coiled-coil structures: trimer, tetramer, and heterohexamer, underscoring a highly polymorphic nature of the SARS-CoV-2 stalk sequence. | ||
| + | |||
| + | Structural polymorphism of coiled-coils from the stalk domain of SARS-CoV-2 spike protein.,Zivic Z, Strmsek Z, Novinec M, Lah J, Hadzi S FASEB J. 2022 Mar;36(3):e22199. doi: 10.1096/fj.202101670R. PMID:35157347<ref>PMID:35157347</ref> | ||
| + | |||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 7owx" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Spike protein 3D structures|Spike protein 3D structures]] | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
Current revision
Structure of coiled-coil tetramer from SARS-CoV-2 spike stalk region
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