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3gxk

From Proteopedia

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Current revision (15:45, 1 November 2023) (edit) (undo)
 
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<StructureSection load='3gxk' size='340' side='right'caption='[[3gxk]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='3gxk' size='340' side='right'caption='[[3gxk]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3gxk]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Atlantic_cod Atlantic cod]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GXK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GXK FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3gxk]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Gadus_morhua Gadus morhua]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GXK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GXK FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3gxr|3gxr]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lysozyme ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=8049 Atlantic cod])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gxk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gxk OCA], [https://pdbe.org/3gxk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gxk RCSB], [https://www.ebi.ac.uk/pdbsum/3gxk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gxk ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gxk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gxk OCA], [https://pdbe.org/3gxk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gxk RCSB], [https://www.ebi.ac.uk/pdbsum/3gxk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gxk ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/B9TU22_GADMO B9TU22_GADMO]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Atlantic cod]]
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[[Category: Gadus morhua]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Lysozyme]]
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[[Category: Finstad S]]
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[[Category: Finstad, S]]
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[[Category: Helland R]]
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[[Category: Helland, R]]
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[[Category: Kyomuhendo P]]
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[[Category: Kyomuhendo, P]]
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[[Category: Larsen AN]]
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[[Category: Larsen, A N]]
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[[Category: Larsen RL]]
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[[Category: Larsen, R L]]
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[[Category: Active site residue]]
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[[Category: Fish lysozyme]]
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[[Category: Hydrolase]]
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[[Category: Immune system]]
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[[Category: Muramidase activity]]
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[[Category: Substrate binding site]]
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[[Category: Surface potential]]
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Current revision

The crystal structure of g-type lysozyme from Atlantic cod (Gadus morhua L.) in complex with NAG oligomers sheds new light on substrate binding and the catalytic mechanism. Native structure to 1.9

PDB ID 3gxk

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OCA

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