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3h4v

From Proteopedia

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Current revision (15:47, 1 November 2023) (edit) (undo)
 
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<StructureSection load='3h4v' size='340' side='right'caption='[[3h4v]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
<StructureSection load='3h4v' size='340' side='right'caption='[[3h4v]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3h4v]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Leima Leima]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2p8k 2p8k]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H4V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3H4V FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3h4v]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Leishmania_major Leishmania major]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2p8k 2p8k]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3H4V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3H4V FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DVP:METHYL+1-(4-{[(2,4-DIAMINOPTERIDIN-6-YL)METHYL]AMINO}BENZOYL)PIPERIDINE-4-CARBOXYLATE'>DVP</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2qhx|2qhx]], [[2bf7|2bf7]], [[2bfm|2bfm]], [[2bfa|2bfa]], [[1w0c|1w0c]], [[1e92|1e92]], [[1p33|1p33]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DVP:METHYL+1-(4-{[(2,4-DIAMINOPTERIDIN-6-YL)METHYL]AMINO}BENZOYL)PIPERIDINE-4-CARBOXYLATE'>DVP</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PTR1, HMTXR ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5664 LEIMA])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Pteridine_reductase Pteridine reductase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.5.1.33 1.5.1.33] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3h4v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h4v OCA], [https://pdbe.org/3h4v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3h4v RCSB], [https://www.ebi.ac.uk/pdbsum/3h4v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3h4v ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3h4v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3h4v OCA], [https://pdbe.org/3h4v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3h4v RCSB], [https://www.ebi.ac.uk/pdbsum/3h4v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3h4v ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/PTR1_LEIMA PTR1_LEIMA]] Exhibits a NADPH-dependent biopterin reductase activity. Has good activity with folate and significant activity with dihydrofolate and dihydrobiopterin, but not with quinonoid dihydrobiopterin. Confers resistance to methotrexate (MTX).<ref>PMID:7972081</ref>
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[https://www.uniprot.org/uniprot/PTR1_LEIMA PTR1_LEIMA] Exhibits a NADPH-dependent biopterin reductase activity. Has good activity with folate and significant activity with dihydrofolate and dihydrobiopterin, but not with quinonoid dihydrobiopterin. Confers resistance to methotrexate (MTX).<ref>PMID:7972081</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Leima]]
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[[Category: Leishmania major]]
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[[Category: Pteridine reductase]]
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[[Category: Gibellini F]]
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[[Category: Gibellini, F]]
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[[Category: Hunter WN]]
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[[Category: Hunter, W N]]
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[[Category: Mcluskey K]]
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[[Category: Mcluskey, K]]
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[[Category: Inhibitor]]
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[[Category: Leishmania]]
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[[Category: Methotrexate resistance]]
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[[Category: Nadp]]
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[[Category: Oxidoreductase]]
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[[Category: Ptr1]]
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[[Category: Short-chain reductase]]
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[[Category: Trypanosoma]]
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Current revision

Selective screening and design to identify inhibitors of leishmania major pteridine reductase 1

PDB ID 3h4v

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