This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3hbr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:19, 6 September 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3hbr' size='340' side='right'caption='[[3hbr]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='3hbr' size='340' side='right'caption='[[3hbr]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3hbr]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_pneumoniae"_(schroeter_1886)_flugge_1886 "bacillus pneumoniae" (schroeter 1886) flugge 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HBR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HBR FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3hbr]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Klebsiella_pneumoniae Klebsiella pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HBR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HBR FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">bla OXA-48 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=573 "Bacillus pneumoniae" (Schroeter 1886) Flugge 1886])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Beta-lactamase Beta-lactamase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.2.6 3.5.2.6] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hbr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hbr OCA], [https://pdbe.org/3hbr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hbr RCSB], [https://www.ebi.ac.uk/pdbsum/3hbr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hbr ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hbr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hbr OCA], [https://pdbe.org/3hbr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hbr RCSB], [https://www.ebi.ac.uk/pdbsum/3hbr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hbr ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q6XEC0_KLEPN Q6XEC0_KLEPN]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 36: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Beta-lactamase]]
+
[[Category: Klebsiella pneumoniae]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Benvenuti, M]]
+
[[Category: Benvenuti M]]
-
[[Category: Calderone, V]]
+
[[Category: Calderone V]]
-
[[Category: Docquier, J D]]
+
[[Category: Docquier JD]]
-
[[Category: Mangani, S]]
+
[[Category: Mangani S]]
-
[[Category: Rossolini, G M]]
+
[[Category: Rossolini GM]]
-
[[Category: Antibiotic]]
+
-
[[Category: Class d beta-lactamase]]
+
-
[[Category: Dimer]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Oxa-48]]
+

Current revision

Crystal structure of OXA-48 beta-lactamase

PDB ID 3hbr

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools