Journal:Acta Cryst D:S2059798322002157
From Proteopedia
(Difference between revisions)
| Line 9: | Line 9: | ||
The ''Kl''Nmd4 protein is made of a three layered ๐ผ/ฮฒ/๐ผ core consisting in a central five stranded parallel ฮฒ-sheet surrounded by six ๐ผ-helices (๐ผ1 to ๐ผ4, ๐ผ10 and ๐ผ11) on one side and five (๐ผ5 to ๐ผ9) on the other side. <scene name='90/905553/Cv/4'>Ribbon representation of the KlNmd4 crystal structure</scene> colored from its N-terminal (blue) to its C-terminal (red) extremities. | The ''Kl''Nmd4 protein is made of a three layered ๐ผ/ฮฒ/๐ผ core consisting in a central five stranded parallel ฮฒ-sheet surrounded by six ๐ผ-helices (๐ผ1 to ๐ผ4, ๐ผ10 and ๐ผ11) on one side and five (๐ผ5 to ๐ผ9) on the other side. <scene name='90/905553/Cv/4'>Ribbon representation of the KlNmd4 crystal structure</scene> colored from its N-terminal (blue) to its C-terminal (red) extremities. | ||
| - | <scene name='90/905553/Cv/8'>Superposition of the full-length KlNmd4 AlphaFold model onto the KlNmd4 crystal structure</scene> (beige). The full-length KlNmd4 AlphaFold model is colored according to the pLDDT values | + | <scene name='90/905553/Cv/8'>Superposition of the full-length KlNmd4 AlphaFold model onto the KlNmd4 crystal structure</scene> (beige). The full-length KlNmd4 AlphaFold model is colored according to the pLDDT values: |
*pLDDT > 90 <span class="text-blue">'''blue'''</span> | *pLDDT > 90 <span class="text-blue">'''blue'''</span> | ||
*70 < pLDDT < 90 <span class="bg-cyan">cyan</span> | *70 < pLDDT < 90 <span class="bg-cyan">cyan</span> | ||
*50 < pLDDT < 70 <span class="bg-yellow">yellow</span> | *50 < pLDDT < 70 <span class="bg-yellow">yellow</span> | ||
*pLDDT < 50 <span class="bg-orange">orange</span> | *pLDDT < 50 <span class="bg-orange">orange</span> | ||
| + | The region 81-114 from the KlNmd4 crystal structure is highlighted in <span class="bg-pink">pink</span>. | ||
<b>References</b><br> | <b>References</b><br> | ||
Revision as of 09:51, 17 March 2022
| |||||||||||
This page complements a publication in scientific journals and is one of the Proteopedia's Interactive 3D Complement pages. For aditional details please see I3DC.
