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5v5x

From Proteopedia

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Current revision (13:42, 4 October 2023) (edit) (undo)
 
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<StructureSection load='5v5x' size='340' side='right'caption='[[5v5x]], [[Resolution|resolution]] 3.50&Aring;' scene=''>
<StructureSection load='5v5x' size='340' side='right'caption='[[5v5x]], [[Resolution|resolution]] 3.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5v5x]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5V5X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5V5X FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5v5x]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5V5X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5V5X FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.5&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Pcdhgb7, mCG_133388 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5v5x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5v5x OCA], [https://pdbe.org/5v5x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5v5x RCSB], [https://www.ebi.ac.uk/pdbsum/5v5x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5v5x ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5v5x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5v5x OCA], [https://pdbe.org/5v5x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5v5x RCSB], [https://www.ebi.ac.uk/pdbsum/5v5x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5v5x ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/Q91XX3_MOUSE Q91XX3_MOUSE]] Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain.[SAAS:SAAS00348345]
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[https://www.uniprot.org/uniprot/Q91XX3_MOUSE Q91XX3_MOUSE] Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain.[SAAS:SAAS00348345]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Lk3 transgenic mice]]
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[[Category: Mus musculus]]
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[[Category: Bahna, F]]
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[[Category: Bahna F]]
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[[Category: Goodman, K M]]
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[[Category: Goodman KM]]
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[[Category: Honig, B]]
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[[Category: Honig B]]
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[[Category: Mannepalli, S]]
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[[Category: Mannepalli S]]
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[[Category: Shapiro, L]]
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[[Category: Shapiro L]]
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[[Category: Cell adhesion]]
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Current revision

Protocadherin gammaB7 EC3-6 cis-dimer structure

PDB ID 5v5x

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