2v0g

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Current revision (15:00, 13 December 2023) (edit) (undo)
 
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<StructureSection load='2v0g' size='340' side='right'caption='[[2v0g]], [[Resolution|resolution]] 3.50&Aring;' scene=''>
<StructureSection load='2v0g' size='340' side='right'caption='[[2v0g]], [[Resolution|resolution]] 3.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2v0g]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/"flavobacterium_thermophilum"_yoshida_and_oshima_1971 "flavobacterium thermophilum" yoshida and oshima 1971]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V0G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V0G FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2v0g]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V0G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V0G FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=LEU:LEUCINE'>LEU</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.5&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ANZ:[(6-AMINO-9H-PURIN-9-YL)-[5-FLUORO-1,3-DIHYDRO-1-HYDROXY-2,1-BENZOXABOROLE]-4YL]METHYL+DIHYDROGEN+PHOSPHATE'>ANZ</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ANZ:[(6-AMINO-9H-PURIN-9-YL)-[5-FLUORO-1,3-DIHYDRO-1-HYDROXY-2,1-BENZOXABOROLE]-4YL]METHYL+DIHYDROGEN+PHOSPHATE'>ANZ</scene>, <scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>, <scene name='pdbligand=LEU:LEUCINE'>LEU</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1h3n|1h3n]], [[1obc|1obc]], [[1obh|1obh]], [[2bte|2bte]], [[2byt|2byt]], [[2v0c|2v0c]]</div></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v0g OCA], [https://pdbe.org/2v0g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v0g RCSB], [https://www.ebi.ac.uk/pdbsum/2v0g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v0g ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v0g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v0g OCA], [https://pdbe.org/2v0g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v0g RCSB], [https://www.ebi.ac.uk/pdbsum/2v0g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v0g ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q7SIE4_THETH Q7SIE4_THETH]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Flavobacterium thermophilum yoshida and oshima 1971]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Akama, T]]
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[[Category: Thermus thermophilus]]
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[[Category: Alley, M R.K]]
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[[Category: Akama T]]
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[[Category: Baker, S]]
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[[Category: Alley MRK]]
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[[Category: Benkovic, S J]]
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[[Category: Baker S]]
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[[Category: Crepin, T]]
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[[Category: Benkovic SJ]]
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[[Category: Cusack, S]]
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[[Category: Crepin T]]
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[[Category: Hernandez, V]]
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[[Category: Cusack S]]
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[[Category: Mao, W]]
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[[Category: Hernandez V]]
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[[Category: Martinis, S A]]
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[[Category: Mao W]]
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[[Category: Plattner, J]]
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[[Category: Martinis SA]]
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[[Category: Rock, F]]
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[[Category: Plattner J]]
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[[Category: Shapiro, L]]
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[[Category: Rock F]]
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[[Category: Tukalo, M]]
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[[Category: Shapiro L]]
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[[Category: Yaremchuk, A]]
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[[Category: Tukalo M]]
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[[Category: Zhang, Y]]
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[[Category: Yaremchuk A]]
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[[Category: Zhou, H]]
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[[Category: Zhang Y]]
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[[Category: Aminoacyl-trna synthetase]]
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[[Category: Zhou H]]
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[[Category: Atp-binding]]
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[[Category: Class i aminoacyl- trna synthetase]]
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[[Category: Editing]]
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[[Category: Ligase]]
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[[Category: Metal-binding]]
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[[Category: Nucleotide-binding zinc]]
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[[Category: Protein biosynthesis]]
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[[Category: Synthetase]]
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Current revision

LEUCYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH A tRNA(leu) transcript with 5-FLUORO-1,3-DIHYDRO-1-HYDROXY-2,1- BENZOXABOROLE (AN2690) forming an adduct to the ribose of adenosine- 76 in the enzyme editing site.

PDB ID 2v0g

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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