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2v5c

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Current revision (09:55, 9 May 2024) (edit) (undo)
 
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<StructureSection load='2v5c' size='340' side='right'caption='[[2v5c]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='2v5c' size='340' side='right'caption='[[2v5c]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2v5c]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_perfringens"_veillon_and_zuber_1898 "bacillus perfringens" veillon and zuber 1898]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V5C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V5C FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2v5c]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_perfringens Clostridium perfringens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2V5C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2V5C FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CAC:CACODYLATE+ION'>CAC</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2j62|2j62]], [[2jh2|2jh2]], [[2vur|2vur]], [[2v5d|2v5d]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CAC:CACODYLATE+ION'>CAC</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Beta-N-acetylhexosaminidase Beta-N-acetylhexosaminidase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.52 3.2.1.52] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v5c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v5c OCA], [https://pdbe.org/2v5c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v5c RCSB], [https://www.ebi.ac.uk/pdbsum/2v5c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v5c ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2v5c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2v5c OCA], [https://pdbe.org/2v5c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2v5c RCSB], [https://www.ebi.ac.uk/pdbsum/2v5c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2v5c ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/OGA_CLOP1 OGA_CLOP1]] Biological function unknown. Capable of hydrolyzing the glycosidic link of O-GlcNAcylated proteins.
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[https://www.uniprot.org/uniprot/OGA_CLOP1 OGA_CLOP1] Biological function unknown. Capable of hydrolyzing the glycosidic link of O-GlcNAcylated proteins.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bacillus perfringens veillon and zuber 1898]]
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[[Category: Clostridium perfringens]]
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[[Category: Beta-N-acetylhexosaminidase]]
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[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Adams, J J]]
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[[Category: Adams JJ]]
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[[Category: Boraston, A B]]
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[[Category: Boraston AB]]
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[[Category: Czjzek, M]]
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[[Category: Czjzek M]]
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[[Category: Ficko-Blean, E]]
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[[Category: Ficko-Blean E]]
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[[Category: Gregg, K J]]
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[[Category: Gregg KJ]]
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[[Category: Hehemann, J H]]
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[[Category: Hehemann JH]]
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[[Category: Smith, S J]]
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[[Category: Smith SJ]]
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[[Category: Carbohydrate binding module]]
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[[Category: Clostridium perfringen]]
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[[Category: Coiled coil]]
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[[Category: Family 84 glycoside hydrolase]]
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[[Category: Gh84]]
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[[Category: Gh84c]]
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[[Category: Glycosidase]]
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[[Category: Hydrolase]]
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Current revision

Family 84 glycoside hydrolase from Clostridium perfringens, 2.1 Angstrom structure

PDB ID 2v5c

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