Sandbox Reserved 1715

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 61: Line 61:
'''2.''' In the intermediate activation state (known as the open-closed conformation), one glutamate is bound in one binding pocket of VFT. This <scene name='90/904320/Mglu_binding/4'>glutamate bound state</scene> is still considered inactive as the receptor has not changed the conformations in the CRD and thus the TMD. With the same asymmetric transmembrane helices formation, a TM3-TM4 interface is still present and mGlu cannot interact with a G protein. (IMAGE)
'''2.''' In the intermediate activation state (known as the open-closed conformation), one glutamate is bound in one binding pocket of VFT. This <scene name='90/904320/Mglu_binding/4'>glutamate bound state</scene> is still considered inactive as the receptor has not changed the conformations in the CRD and thus the TMD. With the same asymmetric transmembrane helices formation, a TM3-TM4 interface is still present and mGlu cannot interact with a G protein. (IMAGE)
-
'''3.''' A second glutamate binds to the other binding pocket of the VFT. Mediated by L639, F643, N735, W773, and F776, a positive allosteric modulator (PAM) also binds within the seven TMD helices of the alpha chain. This closed conformation with an inter-lobe domain of 25 degrees is considered the active conformation. The binding of these ligands allows the CRD to compact and come together. This transformation causes the TMD to form another asymmetric conformation with a TM6-TM6 interface between the chains.
+
'''3.''' A second glutamate binds to the other <scene name='90/904320/Active_site_interactions/3'>binding pocket</scene> of the VFT. Mediated by L639, F643, N735, W773, and F776, a positive allosteric modulator (PAM) also binds within the seven TMD helices of the alpha chain. This closed conformation with an inter-lobe domain of 25 degrees is considered the active conformation. The binding of these ligands allows the CRD to compact and come together. This transformation causes the TMD to form another asymmetric conformation with a TM6-TM6 interface between the chains.
'''4.''' The change in the arrangement of the helices allows for intracellular loop 2 (ICL2) and the C-terminus to be properly ordered to interact with a G protein. While hydrogen bonding is present, this coupling is primarily driven by the hydrophobic interactions in the interface with the ɑ5 helix of the G protein.. This coupling can only occur in the presence of a PAM as the pocket in which the coupling occurs would be completely closed in its absence.
'''4.''' The change in the arrangement of the helices allows for intracellular loop 2 (ICL2) and the C-terminus to be properly ordered to interact with a G protein. While hydrogen bonding is present, this coupling is primarily driven by the hydrophobic interactions in the interface with the ɑ5 helix of the G protein.. This coupling can only occur in the presence of a PAM as the pocket in which the coupling occurs would be completely closed in its absence.
Line 76: Line 76:
</StructureSection>
</StructureSection>
-
<scene name='90/904320/Active_site_interactions/3'>Active site interactions</scene>
 
<scene name='90/904320/Mglu_binding/4'>mGlu binding</scene>
<scene name='90/904320/Mglu_binding/4'>mGlu binding</scene>

Revision as of 05:12, 28 March 2022

Metabotropic Glutamate Receptor

Inactive Metabotropic Glutamate Receptor 2 PDB:7epa

Drag the structure with the mouse to rotate




References

  1. 1.0 1.1 Ransey E, Paredes E, Dey SK, Das SR, Heroux A, Macbeth MR. Crystal structure of the Entamoeba histolytica RNA lariat debranching enzyme EhDbr1 reveals a catalytic Zn(2+) /Mn(2+) heterobinucleation. FEBS Lett. 2017 Jul;591(13):2003-2010. doi: 10.1002/1873-3468.12677. Epub 2017, Jun 14. PMID:28504306 doi:http://dx.doi.org/10.1002/1873-3468.12677
  2. 2.0 2.1 Seven AB, Barros-Alvarez X, de Lapeyriere M, Papasergi-Scott MM, Robertson MJ, Zhang C, Nwokonko RM, Gao Y, Meyerowitz JG, Rocher JP, Schelshorn D, Kobilka BK, Mathiesen JM, Skiniotis G. G-protein activation by a metabotropic glutamate receptor. Nature. 2021 Jun 30. pii: 10.1038/s41586-021-03680-3. doi:, 10.1038/s41586-021-03680-3. PMID:34194039 doi:http://dx.doi.org/10.1038/s41586-021-03680-3

Student Contributors

  • Courtney Vennekotter
  • Cade Chezem
Personal tools