We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

5jwv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:49, 27 September 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5jwv' size='340' side='right'caption='[[5jwv]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
<StructureSection load='5jwv' size='340' side='right'caption='[[5jwv]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5jwv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterobacteria_phage_t4_sensu_lato Enterobacteria phage t4 sensu lato]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JWV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5JWV FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5jwv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_phage_T4 Escherichia phage T4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5JWV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5JWV FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PYJ:PHENYLETHANE'>PYJ</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[5jwt|5jwt]], [[5jwu|5jwu]], [[5jww|5jww]], [[5jwx|5jwx]], [[5jws|5jws]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PYJ:PHENYLETHANE'>PYJ</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5jwv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jwv OCA], [https://pdbe.org/5jwv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5jwv RCSB], [https://www.ebi.ac.uk/pdbsum/5jwv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5jwv ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5jwv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5jwv OCA], [https://pdbe.org/5jwv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5jwv RCSB], [https://www.ebi.ac.uk/pdbsum/5jwv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5jwv ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/ENLYS_BPT4 ENLYS_BPT4]] Endolysin with lysozyme activity that degrades host peptidoglycans and participates with the holin and spanin proteins in the sequential events which lead to the programmed host cell lysis releasing the mature viral particles. Once the holin has permeabilized the host cell membrane, the endolysin can reach the periplasm and break down the peptidoglycan layer.<ref>PMID:22389108</ref>
+
[https://www.uniprot.org/uniprot/ENLYS_BPT4 ENLYS_BPT4] Endolysin with lysozyme activity that degrades host peptidoglycans and participates with the holin and spanin proteins in the sequential events which lead to the programmed host cell lysis releasing the mature viral particles. Once the holin has permeabilized the host cell membrane, the endolysin can reach the periplasm and break down the peptidoglycan layer.<ref>PMID:22389108</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 21:
==See Also==
==See Also==
-
*[[Lysin|Lysin]]
+
*[[Lysin 3D structures|Lysin 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Enterobacteria phage t4 sensu lato]]
+
[[Category: Escherichia phage T4]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Lysozyme]]
+
[[Category: Fischer M]]
-
[[Category: Fischer, M]]
+
[[Category: Lee H]]
-
[[Category: Lee, H]]
+
[[Category: Liu S-Y]]
-
[[Category: Liu, S Y]]
+
[[Category: Shoichet BK]]
-
[[Category: Shoichet, B K]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Phage lysozyme azaborine]]
+

Current revision

T4 Lysozyme L99A/M102Q with Ethylbenzene Bound

PDB ID 5jwv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5jwv"
Personal tools