This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


7sky

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:52, 18 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='7sky' size='340' side='right'caption='[[7sky]], [[Resolution|resolution]] 1.37&Aring;' scene=''>
<StructureSection load='7sky' size='340' side='right'caption='[[7sky]], [[Resolution|resolution]] 1.37&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[7sky]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7SKY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7SKY FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[7sky]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bordetella_pertussis Bordetella pertussis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7SKY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7SKY FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3700013&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[7skk|7skk]], [[7ski|7ski]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7sky FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7sky OCA], [https://pdbe.org/7sky PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7sky RCSB], [https://www.ebi.ac.uk/pdbsum/7sky PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7sky ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7sky FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7sky OCA], [https://pdbe.org/7sky PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7sky RCSB], [https://www.ebi.ac.uk/pdbsum/7sky PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7sky ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/TOX1_BORPE TOX1_BORPE]] S1 is an NAD-dependent ADP-ribosyltransferase, which plays a crucial role in the pathogenesis of B.pertussis causing disruption of normal host cellular regulation. It catalyzes the ADP-ribosylation of a cysteine in the alpha subunit of host heterotrimeric G proteins. In the absence of G proteins it also catalyzes the cleavage of NAD(+) into ADP-ribose and nicotinamide. It irreversibly uncouples the G-alpha GTP-binding proteins from their membrane receptors.
+
[https://www.uniprot.org/uniprot/TOX1_BORPE TOX1_BORPE] S1 is an NAD-dependent ADP-ribosyltransferase, which plays a crucial role in the pathogenesis of B.pertussis causing disruption of normal host cellular regulation. It catalyzes the ADP-ribosylation of a cysteine in the alpha subunit of host heterotrimeric G proteins. In the absence of G proteins it also catalyzes the cleavage of NAD(+) into ADP-ribose and nicotinamide. It irreversibly uncouples the G-alpha GTP-binding proteins from their membrane receptors.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 19: Line 19:
</div>
</div>
<div class="pdbe-citations 7sky" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 7sky" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Pertussis toxin|Pertussis toxin]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Bordetella pertussis]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Beddoe, T]]
+
[[Category: Beddoe T]]
-
[[Category: Littler, D R]]
+
[[Category: Littler DR]]
-
[[Category: Pulliainen, A]]
+
[[Category: Pulliainen A]]
-
[[Category: Rossjohn, J]]
+
[[Category: Rossjohn J]]
-
[[Category: Adp ribosyltransferase]]
+
-
[[Category: Pertussis]]
+
-
[[Category: Pertussis toxin]]
+
-
[[Category: S1]]
+
-
[[Category: Toxin]]
+
-
[[Category: Transferase]]
+
-
[[Category: Whooping cough]]
+

Current revision

Pertussis toxin S1 bound to NAD+

PDB ID 7sky

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools