This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3ijr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:50, 6 September 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3ijr' size='340' side='right'caption='[[3ijr]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
<StructureSection load='3ijr' size='340' side='right'caption='[[3ijr]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3ijr]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis_ames_"ancestor" Bacillus anthracis ames "ancestor"]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IJR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IJR FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3ijr]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis_str._'Ames_Ancestor' Bacillus anthracis str. 'Ames Ancestor']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IJR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IJR FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3i3o|3i3o]]</div></td></tr>
+
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BAS0712, BA_0748, GBAA0748, GBAA_0748 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=261594 Bacillus anthracis Ames "Ancestor"])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ijr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ijr OCA], [https://pdbe.org/3ijr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ijr RCSB], [https://www.ebi.ac.uk/pdbsum/3ijr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ijr ProSAT], [https://www.topsan.org/Proteins/CSGID/3ijr TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ijr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ijr OCA], [https://pdbe.org/3ijr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ijr RCSB], [https://www.ebi.ac.uk/pdbsum/3ijr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ijr ProSAT], [https://www.topsan.org/Proteins/CSGID/3ijr TOPSAN]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A0A6L8PL20_BACAN A0A6L8PL20_BACAN]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 22: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillus anthracis ames ancestor]]
+
[[Category: Bacillus anthracis str. 'Ames Ancestor']]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Anderson, W F]]
+
[[Category: Anderson WF]]
-
[[Category: Structural genomic]]
+
[[Category: Gordon E]]
-
[[Category: Gordon, E]]
+
[[Category: Halavaty AS]]
-
[[Category: Halavaty, A S]]
+
[[Category: Kwon K]]
-
[[Category: Kwon, K]]
+
[[Category: Minasov G]]
-
[[Category: Minasov, G]]
+
[[Category: Onopriyenko O]]
-
[[Category: Onopriyenko, O]]
+
[[Category: Savchenko A]]
-
[[Category: Savchenko, A]]
+
[[Category: Skarina T]]
-
[[Category: Skarina, T]]
+
-
[[Category: Csgid]]
+
-
[[Category: Infectious disease]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Short chain dehydrogenase]]
+

Current revision

2.05 Angstrom resolution crystal structure of a short chain dehydrogenase from Bacillus anthracis str. 'Ames Ancestor' in complex with NAD+

PDB ID 3ijr

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools