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3ivz

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Current revision (07:59, 6 September 2023) (edit) (undo)
 
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<StructureSection load='3ivz' size='340' side='right'caption='[[3ivz]], [[Resolution|resolution]] 1.57&Aring;' scene=''>
<StructureSection load='3ivz' size='340' side='right'caption='[[3ivz]], [[Resolution|resolution]] 1.57&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3ivz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrab Pyrab]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IVZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IVZ FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3ivz]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_abyssi_GE5 Pyrococcus abyssi GE5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IVZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IVZ FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.57&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSX:S-OXY+CYSTEINE'>CSX</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CSX:S-OXY+CYSTEINE'>CSX</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3iw3|3iw3]]</div></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">nit-30, PAB1449, PYRAB13990 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272844 PYRAB])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Beta-ureidopropionase Beta-ureidopropionase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.6 3.5.1.6] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ivz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ivz OCA], [https://pdbe.org/3ivz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ivz RCSB], [https://www.ebi.ac.uk/pdbsum/3ivz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ivz ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ivz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ivz OCA], [https://pdbe.org/3ivz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ivz RCSB], [https://www.ebi.ac.uk/pdbsum/3ivz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ivz ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/NITR_PYRAB NITR_PYRAB] Nitrilase that hydrolyzes preferentially aliphatic nitriles like malononitrile and fumaronitrile in vitro. These dinitriles are converted to the corresponding monoacid mononitriles, showing the enzyme is regioselective. Cannot hydrolyze compounds with a nitrile group bound to an aromatic ring or amino acid. Its biological role is unknown.<ref>PMID:16495079</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Beta-ureidopropionase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Pyrab]]
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[[Category: Pyrococcus abyssi GE5]]
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[[Category: Antranikian, G]]
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[[Category: Antranikian G]]
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[[Category: Raczynska, J]]
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[[Category: Raczynska J]]
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[[Category: Rypniewski, W]]
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[[Category: Rypniewski W]]
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[[Category: Vorgias, C]]
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[[Category: Vorgias C]]
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[[Category: Alpha-beta sandwich]]
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[[Category: Hydrolase]]
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Current revision

Crystal structure of hyperthermophilic nitrilase

PDB ID 3ivz

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