This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3j79

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 3: Line 3:
<SX load='3j79' size='340' side='right' viewer='molstar' caption='[[3j79]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
<SX load='3j79' size='340' side='right' viewer='molstar' caption='[[3j79]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3j79]] is a 44 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum Plasmodium falciparum]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1vx6 1vx6] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1vx7 1vx7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3J79 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3J79 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3j79]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum_3D7 Plasmodium falciparum 3D7]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1vx6 1vx6] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1vx7 1vx7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3J79 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3J79 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3j7a|3j7a]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3j79 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3j79 OCA], [https://pdbe.org/3j79 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3j79 RCSB], [https://www.ebi.ac.uk/pdbsum/3j79 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3j79 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3j79 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3j79 OCA], [https://pdbe.org/3j79 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3j79 RCSB], [https://www.ebi.ac.uk/pdbsum/3j79 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3j79 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/C0H4L5_PLAF7 C0H4L5_PLAF7]] Binds to the 23S rRNA (By similarity).[RuleBase:RU000576]
+
[https://www.uniprot.org/uniprot/Q8I3T9_PLAF7 Q8I3T9_PLAF7]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 19: Line 19:
</div>
</div>
<div class="pdbe-citations 3j79" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 3j79" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Ribosome 3D structures|Ribosome 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 24: Line 27:
</SX>
</SX>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Plasmodium falciparum]]
+
[[Category: Plasmodium falciparum 3D7]]
-
[[Category: Bai, X C]]
+
[[Category: Bai XC]]
-
[[Category: Baum, J]]
+
[[Category: Baum J]]
-
[[Category: Brown, A]]
+
[[Category: Brown A]]
-
[[Category: Condron, M]]
+
[[Category: Condron M]]
-
[[Category: Fernandez, I S]]
+
[[Category: Fernandez IS]]
-
[[Category: Hanssen, E]]
+
[[Category: Hanssen E]]
-
[[Category: Scheres, S H.W]]
+
[[Category: Scheres SHW]]
-
[[Category: Tan, Y H]]
+
[[Category: Tan YH]]
-
[[Category: Wong, W]]
+
[[Category: Wong W]]
-
[[Category: Emetine]]
+
-
[[Category: Ribosome-inhibitor complex]]
+

Revision as of 14:17, 24 January 2024

Cryo-EM structure of the Plasmodium falciparum 80S ribosome bound to the anti-protozoan drug emetine, large subunit

3j79, resolution 3.20Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3j79"
Personal tools