Oligosaccharyltransferase
From Proteopedia
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The OST complex varies between prokaryotic and eukaryotic organisms. In eukaryotic cells this complex consists of several non-identical subunits. Where in single celled organisms such as bacteria, this complex exists as a single unit. In mammalian cells the OST complex either contains an STT3A (OST-A) or an STT3B (OST-B) subunit, both being paralogues of the Stt3 subunit. Recent cryo-EM of both of these structures have led to new discoveries on their differences. OST-B is bounded by an acceptor peptide and donor substrate (dolichylphosphate) compared to the OST-A complex which is only bound by dolichylphosphate. This difference suggests different affinities of both complexes in relation to the acceptor substrates.<ref name="structure1">doi:10.3390/biom10040624</ref> Given this there still is not enough information to fully understand the difference in the roles between the two complexes. It remains a future goal to study these non-identical subunits and their roles through N-glycosylation to further understand the mechanics of these proteins. | The OST complex varies between prokaryotic and eukaryotic organisms. In eukaryotic cells this complex consists of several non-identical subunits. Where in single celled organisms such as bacteria, this complex exists as a single unit. In mammalian cells the OST complex either contains an STT3A (OST-A) or an STT3B (OST-B) subunit, both being paralogues of the Stt3 subunit. Recent cryo-EM of both of these structures have led to new discoveries on their differences. OST-B is bounded by an acceptor peptide and donor substrate (dolichylphosphate) compared to the OST-A complex which is only bound by dolichylphosphate. This difference suggests different affinities of both complexes in relation to the acceptor substrates.<ref name="structure1">doi:10.3390/biom10040624</ref> Given this there still is not enough information to fully understand the difference in the roles between the two complexes. It remains a future goal to study these non-identical subunits and their roles through N-glycosylation to further understand the mechanics of these proteins. | ||
| - | + | <scene name='91/910721/Stt3a/1'>STT3A subunit</scene> | |
It is the STT3 subunit that performs the catalytic activity for N-glycosylation. The OST-A complex which contains STT3A is responsible for the majority of the glycosylation. This complex is exposed directly to the unfolded polypeptide interacting with the Sec61 translocon. The acceptor region of the polypeptide emerging from the ribosome makes contact with the STT3A which carries out glycosylation. This initial contact of the polypeptide is absent with the OST-B complex. The STT3B unit glycosylates any missed acceptor sites that weren’t initially glycosylated by STT3A. This unit acts more as a proofreading complex to ensure all regions are glycosylated. Efficiency of the STT3B unit is determined by diffusion rate of the substrate after being skipped and the folding rate of glycoproteins<ref name="structure2">DOI:10.1126/science.aaz3505</ref>. | It is the STT3 subunit that performs the catalytic activity for N-glycosylation. The OST-A complex which contains STT3A is responsible for the majority of the glycosylation. This complex is exposed directly to the unfolded polypeptide interacting with the Sec61 translocon. The acceptor region of the polypeptide emerging from the ribosome makes contact with the STT3A which carries out glycosylation. This initial contact of the polypeptide is absent with the OST-B complex. The STT3B unit glycosylates any missed acceptor sites that weren’t initially glycosylated by STT3A. This unit acts more as a proofreading complex to ensure all regions are glycosylated. Efficiency of the STT3B unit is determined by diffusion rate of the substrate after being skipped and the folding rate of glycoproteins<ref name="structure2">DOI:10.1126/science.aaz3505</ref>. | ||
Revision as of 18:05, 26 April 2022
Oligosaccharyltransferase
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References
- ↑ 1.0 1.1 doi: https://dx.doi.org/10.2210/rcsb_pdb/mom_2022_2
- ↑ 2.0 2.1 Mohanty S, Chaudhary BP, Zoetewey D. Structural Insight into the Mechanism of N-Linked Glycosylation by Oligosaccharyltransferase. Biomolecules. 2020 Apr 17;10(4). pii: biom10040624. doi: 10.3390/biom10040624. PMID:32316603 doi:http://dx.doi.org/10.3390/biom10040624
- ↑ Ramirez AS, Kowal J, Locher KP. Cryo-electron microscopy structures of human oligosaccharyltransferase complexes OST-A and OST-B. Science. 2019 Dec 13;366(6471):1372-1375. doi: 10.1126/science.aaz3505. PMID:31831667 doi:http://dx.doi.org/10.1126/science.aaz3505
- ↑ doi: https://dx.doi.org/10.3390/ijms20236074<ref></ref>ThisEMTprocesshastheabilitytoupregulatetheexpressionofPD-L1alongthecatalyticsubunitsofOST,STT3AandSTT3B.TheincreasedregulationofPD-L1allowsformoreoftheseproteinstoundergoglycosylationfurtherensuringtheircellsurfaceexpression.EMTalsohastheabilitytopromoteglycosyltransferasesintheirformationofpoly-N-acetyllactosaminethichprovestobeessentialinthebindingofPD-L1toPD-1ofTcells.ThisdiscoverysuggestsEMTreprogramsOSTtocarryoutthisupregulationestablishingPD-L1-mediatedimmuneescape<refname="tumor1"/>.InsertscenePD-L1Althoughthecellcontext-dependentabilitiesoftheOSTmakethecomplexfavorablefortumorprogression,thisprovestobeapossiblerouteforinhibitionoftumorgrowth.CurrentlytherearenoknowndrugswhichtargetsN-glycosylation.TherearecurrentstudiesthathavedevelopedN-glycosylationinhibitionwhichhasprogressedwhatweknowabouttherelevanceofOSTincancertreatment.AninhibitorcalledN-glycosylationinhibitor1(NGI-1)hasbeendiscoveredwhichhastheabilitypreventN-glycosylationstoppingthefunctionofaninactivatedformofaluciferasemutant(ERLucT)<refname="tumor1"/>.ThisinhibitorhastheabilitytoinhibitthecatalyticfunctionofbothcatalyticsubunitsofOSTfavoringSTT3B.StudyingNGI-1furtherwillhopefullyleadtothedevelopmentoftreatmentswhichcanpreventtumorgrowthwherecurrentdrugsandmedicationsfail.==Viruses==Wecurrentlyareamidstaneverendingwar.Thiswarexistswithvirusesandhasbeenoccurringsincethestartofalllivingthingsandiscenteredgreatlyaroundglycosylatedproteins.Ourcellsareconstantlyevolvingtodevelopdifferentfeaturestoprotectagainstviruses,whileitistheirgoaltodevelopabilitiestoevadeourdefenses.Onewayourcellshadpreventedviralpathogensfrominfectionwastheuseofcellsurfacecarbohydratesto,inasense,flyundertheirradar.Howeverviruseshadevolvedtorecognizethesecarbohydratesandtargetthesecellsforinfection.Thankfullyourimmunesystemisequallyuptospeedasithassinceevolvedtorecognizecertainglycosylatedlipidsandproteinsthatthevirushasacquiredafterhijackingahostcell.intextcitation.<refname="pdb101"/>ThisisasamplescenecreatedwithSATto<scenename="/12/3456/Sample/1">color</scene>byGroup,andanothertomake<scenename="/12/3456/Sample/2">atransparentrepresentation</scene>oftheprotein.YoucanmakeyourownscenesonSATstartingfromscratchorloadingandeditingoneofthesesamplescenes.
