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5vpk
From Proteopedia
(Difference between revisions)
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[5vpk]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Dermatophagoides_farinae Dermatophagoides farinae]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3d6s 3d6s]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VPK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5VPK FirstGlance]. <br> | <table><tr><td colspan='2'>[[5vpk]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Dermatophagoides_farinae Dermatophagoides farinae]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3d6s 3d6s]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VPK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5VPK FirstGlance]. <br> | ||
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5vpk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vpk OCA], [https://pdbe.org/5vpk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5vpk RCSB], [https://www.ebi.ac.uk/pdbsum/5vpk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5vpk ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5vpk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vpk OCA], [https://pdbe.org/5vpk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5vpk RCSB], [https://www.ebi.ac.uk/pdbsum/5vpk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5vpk ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/PEPT1_DERFA PEPT1_DERFA] Thiol protease that hydrolyzes proteins, with a preference for Phe or basic residues. | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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[[Category: Dermatophagoides farinae]] | [[Category: Dermatophagoides farinae]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Chapman | + | [[Category: Chapman MD]] |
| - | [[Category: Chruszcz | + | [[Category: Chruszcz M]] |
| - | [[Category: Minor | + | [[Category: Minor W]] |
| - | [[Category: Pomes | + | [[Category: Pomes A]] |
| - | [[Category: Vailes | + | [[Category: Vailes LD]] |
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Current revision
CRYSTAL STRUCTURE OF MITE ALLERGEN DER F 1
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