7u13

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 3: Line 3:
<StructureSection load='7u13' size='340' side='right'caption='[[7u13]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
<StructureSection load='7u13' size='340' side='right'caption='[[7u13]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[7u13]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7U13 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7U13 FirstGlance]. <br>
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7U13 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7U13 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7u13 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7u13 OCA], [https://pdbe.org/7u13 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7u13 RCSB], [https://www.ebi.ac.uk/pdbsum/7u13 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7u13 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7u13 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7u13 OCA], [https://pdbe.org/7u13 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7u13 RCSB], [https://www.ebi.ac.uk/pdbsum/7u13 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7u13 ProSAT]</span></td></tr>
</table>
</table>
-
== Disease ==
 
-
[[https://www.uniprot.org/uniprot/T106B_HUMAN T106B_HUMAN]] Progressive non-fluent aphasia;Semantic dementia;Behavioral variant of frontotemporal dementia. The gene represented in this entry acts as a disease modifier. Risk alleles confer genetic susceptibility by increasing gene expression (PubMed:20154673, PubMed:21178100). Increased expression may be the result of down-regulation of microRNA miR-132 and miR-212, that repress TMEM106B expression (PubMed:22895706). Thr-185 is a risk allele associated with lower GRN protein levels and early age at onset in GRN UP-FTD mutation carriers: it presents slower protein degradation that leads to higher steady-state TMEM106B levels, leading to alterations in the intracellular versus extracellular partitioning of GRN (PubMed:23742080).<ref>PMID:20154673</ref> <ref>PMID:21178100</ref> <ref>PMID:22895706</ref> <ref>PMID:23742080</ref> The gene represented in this entry acts as a disease modifier. The disease may be caused by variants affecting the gene represented in this entry.
 
-
== Function ==
 
-
[[https://www.uniprot.org/uniprot/T106B_HUMAN T106B_HUMAN]] Involved in dendrite morphogenesis and maintenance by regulating lysosomal trafficking via its interaction with MAP6. May act by inhibiting retrograde transport of lysosomes along dendrites. Required for dendrite branching.<ref>PMID:23136129</ref> <ref>PMID:24357581</ref>
 
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 25: Line 22:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Arakhamia, T]]
+
[[Category: Arakhamia T]]
-
[[Category: Carlomagno, Y]]
+
[[Category: Carlomagno Y]]
-
[[Category: Chang, A]]
+
[[Category: Chang A]]
-
[[Category: Cook, C N]]
+
[[Category: Cook CN]]
-
[[Category: DeMarco, M L]]
+
[[Category: DeMarco ML]]
-
[[Category: DeTure, M]]
+
[[Category: DeTure M]]
-
[[Category: Dhingra, S]]
+
[[Category: Dhingra S]]
-
[[Category: Dickson, D]]
+
[[Category: Dickson D]]
-
[[Category: Fitzpatrick, A W.P]]
+
[[Category: Fitzpatrick AWP]]
-
[[Category: Forgrave, L M]]
+
[[Category: Forgrave LM]]
-
[[Category: Heeman, B]]
+
[[Category: Heeman B]]
-
[[Category: Lee, C]]
+
[[Category: Lee C]]
-
[[Category: Mackenzie, I R.A]]
+
[[Category: Mackenzie IRA]]
-
[[Category: Perneel, J]]
+
[[Category: Perneel J]]
-
[[Category: Petrucelli, L]]
+
[[Category: Petrucelli L]]
-
[[Category: Rademakers, R]]
+
[[Category: Rademakers R]]
-
[[Category: Simjanoska, M]]
+
[[Category: Simjanoska M]]
-
[[Category: Stowell, M H.B]]
+
[[Category: Stowell MHB]]
-
[[Category: Thierry, M]]
+
[[Category: Thierry M]]
-
[[Category: Wang, C]]
+
[[Category: Wang C]]
-
[[Category: Wang, J]]
+
[[Category: Wang J]]
-
[[Category: Xiang, X]]
+
[[Category: Xiang X]]
-
[[Category: Zhang, G]]
+
[[Category: Zhang G]]
-
[[Category: Amyloid fibril]]
+
-
[[Category: Protein fibril]]
+
-
[[Category: Tmem106b]]
+

Revision as of 11:35, 23 October 2024

TMEM106B(120-254) singlet amyloid fibril from frontotemporal lobar degeneration with TDP-43 pathology (FTLD-TDP) type A (case 4)

PDB ID 7u13

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools