1e7n
From Proteopedia
(Difference between revisions)
Line 3: | Line 3: | ||
<StructureSection load='1e7n' size='340' side='right'caption='[[1e7n]], [[Resolution|resolution]] 2.35Å' scene=''> | <StructureSection load='1e7n' size='340' side='right'caption='[[1e7n]], [[Resolution|resolution]] 2.35Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[1e7n]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[1e7n]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E7N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1E7N FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1e7n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e7n OCA], [https://pdbe.org/1e7n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1e7n RCSB], [https://www.ebi.ac.uk/pdbsum/1e7n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1e7n ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.35Å</td></tr> |
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1e7n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e7n OCA], [https://pdbe.org/1e7n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1e7n RCSB], [https://www.ebi.ac.uk/pdbsum/1e7n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1e7n ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
- | + | [https://www.uniprot.org/uniprot/CRBB2_MOUSE CRBB2_MOUSE] Crystallins are the dominant structural components of the vertebrate eye lens. | |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Line 18: | Line 19: | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1e7n ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1e7n ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
- | <div style="background-color:#fffaf0;"> | ||
- | == Publication Abstract from PubMed == | ||
- | betagamma-crystallins from the eye lens are proteins consisting of two similar domains joined by a short linker. All three-dimensional structures of native proteins solved so far reveal similar pseudo-2-fold pairing of the domains reflecting their presumed ancient origin from a single-domain homodimer. However, studies of engineered single domains of members of the betagamma-crystallin superfamily have not revealed a prototype ancestral solution homodimer. Here we report the 2.35 A X-ray structure of the homodimer of the N-terminal domain of rat betaB2-crystallin (betaB2-N). The two identical domains pair in a symmetrical manner very similar to that observed in native betagamma-crystallins, where N and C-terminal domains (which share approximately 35% sequence identity) are related by a pseudo-2-fold axis. betaB2-N thus resembles the ancestral prototype of the betagamma-crystallin superfamily as it self-associates in solution to form a dimer with an essentially identical domain interface as that between the N and C domains in betagamma-crystallins, but without the benefit of a covalent linker. The structure provides further evidence for the role of two-domain pairing in stabilising the protomer fold. These results support the view that the betagamma-crystallin superfamily has evolved by a series of gene duplication and fusion events from a single-domain ancestor capable of forming homodimers. | ||
- | |||
- | The N-terminal domain of betaB2-crystallin resembles the putative ancestral homodimer.,Clout NJ, Basak A, Wieligmann K, Bateman OA, Jaenicke R, Slingsby C J Mol Biol. 2000 Dec 1;304(3):253-7. PMID:11090271<ref>PMID:11090271</ref> | ||
- | |||
- | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
- | </div> | ||
- | <div class="pdbe-citations 1e7n" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
*[[Crystallin 3D structures|Crystallin 3D structures]] | *[[Crystallin 3D structures|Crystallin 3D structures]] | ||
- | == References == | ||
- | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: | + | [[Category: Mus musculus]] |
- | [[Category: Basak | + | [[Category: Basak A]] |
- | [[Category: Bateman | + | [[Category: Bateman OA]] |
- | [[Category: Clout | + | [[Category: Clout NJ]] |
- | [[Category: Jaenicke | + | [[Category: Jaenicke R]] |
- | [[Category: Slingsby | + | [[Category: Slingsby C]] |
- | [[Category: Wieligmann | + | [[Category: Wieligmann K]] |
- | + | ||
- | + | ||
- | + | ||
- | + |
Revision as of 09:59, 20 March 2024
The N-terminal domain of beta-B2-crystallin resembles the putative ancestral homodimer
|