This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
7p1r
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
<StructureSection load='7p1r' size='340' side='right'caption='[[7p1r]], [[Resolution|resolution]] 1.75Å' scene=''> | <StructureSection load='7p1r' size='340' side='right'caption='[[7p1r]], [[Resolution|resolution]] 1.75Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[7p1r]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7P1R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7P1R FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7p1r]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Trichophyton_rubrum Trichophyton rubrum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7P1R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7P1R FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FKD:3-DEOXY-3-FLUORO-D-ERYTHRO-ALPHA-L-MANNO-NON-2-ULOPYRANOSONIC+ACID'>FKD</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FKD:3-DEOXY-3-FLUORO-D-ERYTHRO-ALPHA-L-MANNO-NON-2-ULOPYRANOSONIC+ACID'>FKD</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7p1r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7p1r OCA], [https://pdbe.org/7p1r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7p1r RCSB], [https://www.ebi.ac.uk/pdbsum/7p1r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7p1r ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7p1r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7p1r OCA], [https://pdbe.org/7p1r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7p1r RCSB], [https://www.ebi.ac.uk/pdbsum/7p1r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7p1r ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/A0A178EUH2_TRIRU A0A178EUH2_TRIRU] | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 21: | Line 24: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Gloster, T M]] | ||
| - | [[Category: McMahon, S A]] | ||
| - | [[Category: Carbohydrate]] | ||
| - | [[Category: Carbohydrate metabolism]] | ||
| - | [[Category: Enzyme structure]] | ||
| - | [[Category: Kdn]] | ||
| - | [[Category: Kdnase]] | ||
| - | [[Category: Protein structure]] | ||
| - | [[Category: Sialic acid]] | ||
| - | [[Category: Sialidase]] | ||
[[Category: Trichophyton rubrum]] | [[Category: Trichophyton rubrum]] | ||
| + | [[Category: Gloster TM]] | ||
| + | [[Category: McMahon SA]] | ||
Current revision
Structure of Trichophyton Rubrum KDNase in complex with 2,3-difluoro-KDN
| |||||||||||
