This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3k6y

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:10, 6 September 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3k6y' size='340' side='right'caption='[[3k6y]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
<StructureSection load='3k6y' size='340' side='right'caption='[[3k6y]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3k6y]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_tuberculosis"_(zopf_1883)_klein_1884 "bacillus tuberculosis" (zopf 1883) klein 1884]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K6Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K6Y FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3k6y]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis Mycobacterium tuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K6Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3K6Y FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3k6z|3k6z]]</div></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MT3772, Rv3671c ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1773 "Bacillus tuberculosis" (Zopf 1883) Klein 1884])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k6y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k6y OCA], [https://pdbe.org/3k6y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k6y RCSB], [https://www.ebi.ac.uk/pdbsum/3k6y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k6y ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3k6y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k6y OCA], [https://pdbe.org/3k6y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3k6y RCSB], [https://www.ebi.ac.uk/pdbsum/3k6y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3k6y ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/Y3671_MYCTU Y3671_MYCTU]] Required for M.tuberculosis resistance to oxidative stress in addition to its role in resistance to acid, which is essential for virulence. It protects M.tuberculosis against phagolysosomal concentrations of acid and maintains its intrabacterial pH when phagocytosed by IFN-gamma-activated macrophages.<ref>PMID:18641659</ref> <ref>PMID:20947023</ref>
+
[https://www.uniprot.org/uniprot/Y3671_MYCTU Y3671_MYCTU] Required for M.tuberculosis resistance to oxidative stress in addition to its role in resistance to acid, which is essential for virulence. It protects M.tuberculosis against phagolysosomal concentrations of acid and maintains its intrabacterial pH when phagocytosed by IFN-gamma-activated macrophages.<ref>PMID:18641659</ref> <ref>PMID:20947023</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 24: Line 23:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Biswas, T]]
+
[[Category: Mycobacterium tuberculosis]]
-
[[Category: Ehrt, S]]
+
[[Category: Biswas T]]
-
[[Category: Small, J]]
+
[[Category: Ehrt S]]
-
[[Category: Tsodikov, O V]]
+
[[Category: Small J]]
-
[[Category: Vandal, O]]
+
[[Category: Tsodikov OV]]
-
[[Category: Bent helix]]
+
[[Category: Vandal O]]
-
[[Category: Disulfide]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Oxidative stress]]
+
-
[[Category: Protease]]
+
-
[[Category: Serine protease]]
+

Current revision

Crystal structure of Rv3671c protease from M. tuberculosis, active form

PDB ID 3k6y

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools