3kdr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:45, 7 February 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3kdr' size='340' side='right'caption='[[3kdr]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
<StructureSection load='3kdr' size='340' side='right'caption='[[3kdr]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3kdr]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_diphtheriae"_kruse_in_flugge_1886 "bacillus diphtheriae" kruse in flugge 1886]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KDR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KDR FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3kdr]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_diphtheriae Corynebacterium diphtheriae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KDR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KDR FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DIP1825 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1717 "Bacillus diphtheriae" Kruse in Flugge 1886])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kdr OCA], [https://pdbe.org/3kdr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kdr RCSB], [https://www.ebi.ac.uk/pdbsum/3kdr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kdr ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kdr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kdr OCA], [https://pdbe.org/3kdr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kdr RCSB], [https://www.ebi.ac.uk/pdbsum/3kdr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kdr ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q6NFR1_CORDI Q6NFR1_CORDI]
==See Also==
==See Also==
-
*[[Portal protein|Portal protein]]
+
*[[Portal protein 3D structures|Portal protein 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillus diphtheriae kruse in flugge 1886]]
+
[[Category: Corynebacterium diphtheriae]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Abdullah, J]]
+
[[Category: Abdullah J]]
-
[[Category: Duggan, E]]
+
[[Category: Duggan E]]
-
[[Category: Joachimiak, A]]
+
[[Category: Joachimiak A]]
-
[[Category: Structural genomic]]
+
[[Category: Mulligan R]]
-
[[Category: Mulligan, R]]
+
[[Category: Nocek B]]
-
[[Category: Nocek, B]]
+
[[Category: Stein AJ]]
-
[[Category: Stein, A J]]
+
-
[[Category: Corynebacterium]]
+
-
[[Category: Diphtheriae]]
+
-
[[Category: Hk97 family]]
+
-
[[Category: Mcsg]]
+
-
[[Category: Phage]]
+
-
[[Category: Portal]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Unknown function]]
+

Current revision

The Crystal Structure of a HK97 Family Phage Portal Protein from Corynebacterium diphtheriae to 2.9A

PDB ID 3kdr

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools