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3lpq

From Proteopedia

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Current revision (08:46, 7 February 2024) (edit) (undo)
 
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<StructureSection load='3lpq' size='340' side='right'caption='[[3lpq]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='3lpq' size='340' side='right'caption='[[3lpq]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3lpq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LPQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LPQ FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3lpq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LPQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LPQ FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">C10orf70, CISD1, MDS029, ZCD1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lpq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lpq OCA], [https://pdbe.org/3lpq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lpq RCSB], [https://www.ebi.ac.uk/pdbsum/3lpq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lpq ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lpq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lpq OCA], [https://pdbe.org/3lpq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lpq RCSB], [https://www.ebi.ac.uk/pdbsum/3lpq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lpq ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/CISD1_HUMAN CISD1_HUMAN]] Plays a key role in regulating maximal capacity for electron transport and oxidative phosphorylation (By similarity). May be involved in Fe-S cluster shuttling and/or in redox reactions.<ref>PMID:17584744</ref> <ref>PMID:17766440</ref>
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[https://www.uniprot.org/uniprot/CISD1_HUMAN CISD1_HUMAN] Plays a key role in regulating maximal capacity for electron transport and oxidative phosphorylation (By similarity). May be involved in Fe-S cluster shuttling and/or in redox reactions.<ref>PMID:17584744</ref> <ref>PMID:17766440</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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MitoNEET is the only identified Fe-S protein localized to the outer mitochondrial membrane and a 1.5 A resolution X-ray analysis has revealed a unique structure [Paddock et al. (2007), Proc. Natl Acad. Sci. USA, 104, 14342-14347]. The 2Fe-2S cluster is bound with a 3Cys-1His coordination which defines a new class of 2Fe-2S proteins. The hallmark feature of this class is the single noncysteine ligand His87, which when replaced by Cys decreases the redox potential (E(m)) by approximately 300 mV and increases the stability of the cluster by around sixfold. Unexpectedly, the pH dependence of the lifetime of the 2Fe-2S cluster remains the same as in the wild-type protein. Here, the crystal structure of H87C mitoNEET was determined to 1.7 A resolution (R factor = 18%) to investigate the structural basis of the changes in the properties of the 2Fe-2S cluster. In comparison to the wild type, structural changes are localized to the immediate vicinity of the cluster-binding region. Despite the increased stability, Cys87 displays two distinct conformations, with distances of 2.3 and 3.2 A between the S(gamma) and the outer Fe of the 2Fe-2S cluster. In addition, Lys55 exhibits multiple conformations in the H87C mutant protein. The structure and distinct characteristics of the H87C mutant provide a framework for further studies investigating the effects of mutation on the properties of the 2Fe-2S cluster in this new class of proteins.
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Mutation of the His ligand in mitoNEET stabilizes the 2Fe-2S cluster despite conformational heterogeneity in the ligand environment.,Conlan AR, Paddock ML, Homer C, Axelrod HL, Cohen AE, Abresch EC, Zuris JA, Nechushtai R, Jennings PA Acta Crystallogr D Biol Crystallogr. 2011 Jun;67(Pt 6):516-23. Epub 2011 May 17. PMID:21636891<ref>PMID:21636891</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 3lpq" style="background-color:#fffaf0;"></div>
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== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Human]]
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[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Abresch, E C]]
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[[Category: Abresch EC]]
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[[Category: Axelrod, H L]]
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[[Category: Axelrod HL]]
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[[Category: Cohen, A E]]
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[[Category: Cohen AE]]
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[[Category: Conlan, A R]]
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[[Category: Conlan AR]]
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[[Category: Homer, C]]
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[[Category: Homer C]]
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[[Category: Jennings, P A]]
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[[Category: Jennings PA]]
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[[Category: Nechushtai, R]]
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[[Category: Nechushtai R]]
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[[Category: Paddock, M L]]
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[[Category: Paddock ML]]
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[[Category: Zuris, J]]
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[[Category: Zuris J]]
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[[Category: 2fe-2s cluster]]
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[[Category: Cdgsh protein fold]]
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[[Category: Homodimer]]
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[[Category: Iron]]
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[[Category: Iron-sulfur]]
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[[Category: Membrane]]
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[[Category: Metal binding protein]]
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[[Category: Metal-binding]]
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[[Category: Mitochondrion]]
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[[Category: Mitochondrion outer membrane]]
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[[Category: Neet fold]]
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[[Category: Signal-anchor]]
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[[Category: Transmembrane]]
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Current revision

Human MitoNEET with 2Fe-2S Coordinating Ligand His 87 Replaced With Cys

PDB ID 3lpq

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