7zgc

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'''Unreleased structure'''
 
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The entry 7zgc is ON HOLD until Paper Publication
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==Structure of yeast Sec14p with NPPM481==
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<StructureSection load='7zgc' size='340' side='right'caption='[[7zgc]], [[Resolution|resolution]] 2.24&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[7zgc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7ZGC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7ZGC FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IUO:(4-chloranyl-3-nitro-phenyl)-[4-(2-fluorophenyl)piperazin-1-yl]methanone'>IUO</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7zgc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7zgc OCA], [https://pdbe.org/7zgc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7zgc RCSB], [https://www.ebi.ac.uk/pdbsum/7zgc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7zgc ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/SEC14_YEAST SEC14_YEAST] Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro. Essential for viability and secretion.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Phosphatidylinositol (PtdIns) transfer proteins (PITPs) enhance the activities of PtdIns 4-OH kinases that generate signaling pools of PtdIns-4-phosphate. In that capacity, PITPs serve as key regulators of lipid signaling in eukaryotic cells. Although the PITP phospholipid exchange cycle is the engine that stimulates PtdIns 4-OH kinase activities, the underlying mechanism is not understood. Herein, we apply an integrative structural biology approach to investigate interactions of the yeast PITP Sec14 with small-molecule inhibitors (SMIs) of its phospholipid exchange cycle. Using a combination of X-ray crystallography, solution NMR spectroscopy, and atomistic MD simulations, we dissect how SMIs compete with native Sec14 phospholipid ligands and arrest phospholipid exchange. Moreover, as Sec14 PITPs represent new targets for the development of next-generation antifungal drugs, the structures of Sec14 bound to SMIs of diverse chemotypes reported in this study will provide critical information required for future structure-based design of next-generation lead compounds directed against Sec14 PITPs of virulent fungi.
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Authors: Hong, Z., Johnen, P., Schaaf, G., Bono, F.
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Mechanisms by Which Small Molecules of Diverse Chemotypes Arrest Sec14 Lipid Transfer Activity.,Chen XR, Poudel L, Hong Z, Johnen P, Katti S, Tripathi A, Nile AH, Green SM, Khan D, Schaaf G, Bono F, Bankaitis VA, Igumenova TI J Biol Chem. 2023 Jan 2:102861. doi: 10.1016/j.jbc.2022.102861. PMID:36603766<ref>PMID:36603766</ref>
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Description: Structure of yeast Sec14p with NPPM481
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Bono, F]]
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<div class="pdbe-citations 7zgc" style="background-color:#fffaf0;"></div>
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[[Category: Schaaf, G]]
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== References ==
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[[Category: Hong, Z]]
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<references/>
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[[Category: Johnen, P]]
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Saccharomyces cerevisiae S288C]]
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[[Category: Bono F]]
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[[Category: Hong Z]]
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[[Category: Johnen P]]
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[[Category: Schaaf G]]

Revision as of 06:34, 25 January 2023

Structure of yeast Sec14p with NPPM481

PDB ID 7zgc

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