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3pqs

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Current revision (13:33, 1 March 2024) (edit) (undo)
 
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<StructureSection load='3pqs' size='340' side='right'caption='[[3pqs]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='3pqs' size='340' side='right'caption='[[3pqs]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3pqs]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Actpl Actpl]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PQS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PQS FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3pqs]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Actinobacillus_pleuropneumoniae Actinobacillus pleuropneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PQS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PQS FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CAC:CACODYLATE+ION'>CAC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3pqu|3pqu]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CAC:CACODYLATE+ION'>CAC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tfbA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=715 ACTPL])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pqs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pqs OCA], [https://pdbe.org/3pqs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pqs RCSB], [https://www.ebi.ac.uk/pdbsum/3pqs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pqs ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pqs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pqs OCA], [https://pdbe.org/3pqs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pqs RCSB], [https://www.ebi.ac.uk/pdbsum/3pqs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pqs ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Function ==
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== Publication Abstract from PubMed ==
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[https://www.uniprot.org/uniprot/Q44167_ACTPL Q44167_ACTPL]
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Pathogenic bacteria acquire the essential element iron through specialized uptake pathways that are necessary in the iron limiting environments of the host. Members of the Gram-negative Neisseriaceae and Pasteurellaceae families have adapted to acquire iron from the host iron binding glycoprotein, transferrin (Tf), through a receptor complex comprised of transferrin binding protein (Tbp) A and B. Due to the critical role they play for the bacteria to survive within the host, these surface-exposed proteins are invariably present in clinical isolates and thus are considered prime vaccine targets. The specific interactions between TbpB and Tf are essential and ultimately might be exploited to create a broad-spectrum vaccine. In this study, we report the structure of TbpBs from two porcine pathogens, Actinobacillus pleuropneumoniae and suis. Paradoxically, despite a common Tf target, these swine related TbpBs show substantial sequence variation in their Tf-binding site. The TbpB structures, supported by docking simulations, surface plasmon resonance and hydrogen/deuterium exchange experiments with wild-type and mutant TbpBs, explain how TbpB homologs despite major sequence variation retain structurally conserved elements that are required for binding Tf.
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Structural variations within the transferrin binding site on transferrin binding protein B, TbpB.,Calmettes C, Yu RH, Silva LP, Curran D, Schriemer DC, Schryvers AB, Moraes TF J Biol Chem. 2011 Feb 5. PMID:21297163<ref>PMID:21297163</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 3pqs" style="background-color:#fffaf0;"></div>
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==See Also==
==See Also==
*[[Transferrin-binding protein|Transferrin-binding protein]]
*[[Transferrin-binding protein|Transferrin-binding protein]]
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Actpl]]
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[[Category: Actinobacillus pleuropneumoniae]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Calmettes, C]]
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[[Category: Calmettes C]]
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[[Category: Moraes, T F]]
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[[Category: Moraes TF]]
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[[Category: Beta barrel]]
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[[Category: Iron acquisition]]
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[[Category: Lipid binding protein]]
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[[Category: Lipoprotein]]
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[[Category: Outermembrane]]
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[[Category: Transferrin]]
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[[Category: Transferrin binding]]
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[[Category: Transferrin receptor]]
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[[Category: Vaccine candidate]]
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Current revision

The crystal structures of porcine pathogen ApH87_TbpB

PDB ID 3pqs

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