User:Clara Costa D'Elia/Sandbox 1
From Proteopedia
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This is a default text for your page '''Clara Costa D'Elia/Sandbox 1'''. Click above on '''edit this page''' to modify. Be careful with the < and > signs. | This is a default text for your page '''Clara Costa D'Elia/Sandbox 1'''. Click above on '''edit this page''' to modify. Be careful with the < and > signs. | ||
You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue. | You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue. | ||
+ | ==introduction== | ||
+ | Photosynthesis represents the main source of energy sustaining life on earth. The primary process of photosynthesis starts with the absorption of sunlight by an arrangement of photosynthetic pigments embedded into a proteic matrix called the light harvesting (LH) antenna complexes. The excitation energy of | ||
+ | photosynthetic pigments is then transferred to the photosynthetic reaction center where it is converted into chemical energy. The primary process of photosynthesis occurs with a quantum yield close to unity. | ||
+ | Most photosynthetics pigments are chlorophylls (Chl), bacteriochlorophylls (BChl), and carotenoids, they represent the keystone for energy storage in photosynthetic organisms. | ||
+ | |||
+ | By convention, the y molecular axis of chlorophylls and bacteriochlorophylls is defined as the axis passing through the N atoms of rings A and C;[[Image:Example.jpg]] | ||
+ | |||
+ | The spectrum of photosynthetic pig- | ||
+ | ments exhibits essentially two characteristic absorption bands | ||
+ | (Figure 2): one of them called the Soret band can be found in the | ||
+ | UV region and is a complex band composed of a large series of | ||
+ | electronic transitions. The other called Q is in the visible region | ||
+ | of the spectrum and is the most important for the photophysics | ||
+ | involved in the photosynthetic process | ||
+ | |||
== Function == | == Function == | ||
light-harvesting complexes make possible for Purple bacterial to maximize the spectrum of light avaiable to them, modifyng the absorption properties of their chromophores; The energy absorbed is used in the bacteria photochemistry. | light-harvesting complexes make possible for Purple bacterial to maximize the spectrum of light avaiable to them, modifyng the absorption properties of their chromophores; The energy absorbed is used in the bacteria photochemistry. | ||
+ | |||
In the LHC The proteins determine the disposition of the pigments, therefore changing and influencing their absorption spectra. | In the LHC The proteins determine the disposition of the pigments, therefore changing and influencing their absorption spectra. | ||
+ | In non-sulphur purple bacteria this energy is trapped by the peripheral light-harvesting complexes (LH2) and core complexes composed of light-harvesting 1 and reaction centre (LH1/RC). The properties and times scales of energy transfer arise from the relative pigment interaction energies and pigment site energy disorder. These in turn are controlled by factors such as inter-pigment geometries and their interactions with protein and membrane environments. | ||
+ | https://www.sciencedirect.com/science/article/pii/S002228360300024X?via%3Dihub | ||
In order to increase the spectral cross-section of absorption, purple bacteria also produce light-harvesting complexes. In most cases a primary light-harvesting complex (LH1) and peripheral light-harvesting complexes (LH2) are synthesised | In order to increase the spectral cross-section of absorption, purple bacteria also produce light-harvesting complexes. In most cases a primary light-harvesting complex (LH1) and peripheral light-harvesting complexes (LH2) are synthesised |
Revision as of 21:34, 5 June 2022
Light Harvesting Complex II
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References
- ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
- ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644