5b5u

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:01, 8 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5b5u' size='340' side='right'caption='[[5b5u]], [[Resolution|resolution]] 2.61&Aring;' scene=''>
<StructureSection load='5b5u' size='340' side='right'caption='[[5b5u]], [[Resolution|resolution]] 2.61&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5b5u]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrfu Pyrfu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5B5U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5B5U FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5b5u]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus] and [https://en.wikipedia.org/wiki/Pyrococcus_furiosus_DSM_3638 Pyrococcus furiosus DSM 3638]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5B5U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5B5U FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ASP:ASPARTIC+ACID'>ASP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.61&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PF2047 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=186497 PYRFU])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ASP:ASPARTIC+ACID'>ASP</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Asparaginase Asparaginase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.1 3.5.1.1] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5b5u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5b5u OCA], [https://pdbe.org/5b5u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5b5u RCSB], [https://www.ebi.ac.uk/pdbsum/5b5u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5b5u ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5b5u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5b5u OCA], [https://pdbe.org/5b5u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5b5u RCSB], [https://www.ebi.ac.uk/pdbsum/5b5u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5b5u ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/ASPG_PYRFU ASPG_PYRFU] Catalyzes the hydrolysis of L-asparagine into L-aspartate and ammonia. Displays no glutaminase activity, a highly desirable therapeutic property.<ref>PMID:20370616</ref> <ref>PMID:22166247</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 25: Line 26:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Asparaginase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Pyrfu]]
+
[[Category: Pyrococcus furiosus]]
-
[[Category: Ashish, F]]
+
[[Category: Pyrococcus furiosus DSM 3638]]
-
[[Category: Kundu, B]]
+
[[Category: Ashish F]]
-
[[Category: Nath, S K]]
+
[[Category: Kundu B]]
-
[[Category: Sharma, P]]
+
[[Category: Nath SK]]
-
[[Category: Tomar, R]]
+
[[Category: Sharma P]]
-
[[Category: Hydrolase]]
+
[[Category: Tomar R]]
-
[[Category: Linkerless]]
+
-
[[Category: Truncated pyrococcus furiosus l-asparaginase]]
+

Current revision

Crystal structure of truncated Pyrococcus furiosus L-asparaginase with peptide

PDB ID 5b5u

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools