7pgg
From Proteopedia
(Difference between revisions)
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==NaVAb1p detergent (DM)== | ==NaVAb1p detergent (DM)== | ||
- | <StructureSection load='7pgg' size='340' side='right'caption='[[7pgg]]' scene=''> | + | <StructureSection load='7pgg' size='340' side='right'caption='[[7pgg]], [[Resolution|resolution]] 2.85Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7PGG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7PGG FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7pgg]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7PGG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7PGG FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7pgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7pgg OCA], [https://pdbe.org/7pgg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7pgg RCSB], [https://www.ebi.ac.uk/pdbsum/7pgg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7pgg ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=VVA:2-{[(S)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}ETHYL+HEPTADECANOATE'>VVA</scene></td></tr> |
+ | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
+ | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[7pg8|7pg8]], [[7pgp|7pgp]], [[7pgf|7pgf]]</div></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7pgg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7pgg OCA], [https://pdbe.org/7pgg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7pgg RCSB], [https://www.ebi.ac.uk/pdbsum/7pgg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7pgg ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Every voltage-gated ion channel (VGIC) has a pore domain (PD) made from four subunits, each comprising an antiparallel transmembrane helix pair bridged by a loop. The extent to which PD subunit structure requires quaternary interactions is unclear. Here, we present crystal structures of a set of bacterial voltage-gated sodium channel (BacNaV) 'pore only' proteins that reveal a surprising collection of non-canonical quaternary arrangements in which the PD tertiary structure is maintained. This context-independent structural robustness, supported by molecular dynamics simulations, indicates that VGIC-PD tertiary structure is independent of quaternary interactions. This fold occurs throughout the VGIC superfamily and in diverse transmembrane and soluble proteins. Strikingly, characterization of PD subunit-binding Fabs indicates that non-canonical quaternary PD conformations can occur in full-length VGICs. Together, our data demonstrate that the VGIC-PD is an autonomously folded unit. This property has implications for VGIC biogenesis, understanding functional states, de novo channel design, and VGIC structural origins. | ||
+ | |||
+ | Quaternary structure independent folding of voltage-gated ion channel pore domain subunits.,Arrigoni C, Lolicato M, Shaya D, Rohaim A, Findeisen F, Fong LK, Colleran CM, Dominik P, Kim SS, Schuermann JP, DeGrado WF, Grabe M, Kossiakoff AA, Minor DL Jr Nat Struct Mol Biol. 2022 Jun 2. pii: 10.1038/s41594-022-00775-x. doi:, 10.1038/s41594-022-00775-x. PMID:35655098<ref>PMID:35655098</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 7pgg" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Arrigoni C]] | + | [[Category: Arrigoni, C]] |
- | [[Category: Lolicato M]] | + | [[Category: Lolicato, M]] |
+ | [[Category: Folding]] | ||
+ | [[Category: Ion channel membrane protein transport protein antibody complex]] | ||
+ | [[Category: Membrane protein]] |
Revision as of 07:32, 29 June 2022
NaVAb1p detergent (DM)
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