This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


7evi

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (17:05, 29 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='7evi' size='340' side='right'caption='[[7evi]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
<StructureSection load='7evi' size='340' side='right'caption='[[7evi]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[7evi]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7EVI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7EVI FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[7evi]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Candidatus_Odinarchaeota_archaeon_LCB_4 Candidatus Odinarchaeota archaeon LCB_4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7EVI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7EVI FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[7evb|7evb]], [[7evc|7evc]], [[7evd|7evd]], [[7eve|7eve]], [[7evg|7evg]], [[7evh|7evh]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7evi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7evi OCA], [https://pdbe.org/7evi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7evi RCSB], [https://www.ebi.ac.uk/pdbsum/7evi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7evi ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7evi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7evi OCA], [https://pdbe.org/7evi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7evi RCSB], [https://www.ebi.ac.uk/pdbsum/7evi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7evi ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A0A1Q9N9N5_ODILC A0A1Q9N9N5_ODILC]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Candidatus Odinarchaeota archaeon LCB_4]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Akil, C]]
+
[[Category: Akil C]]
-
[[Category: Robinson, R C]]
+
[[Category: Robinson RC]]
-
[[Category: Tran, L T]]
+
[[Category: Tran LT]]
-
[[Category: Asgard]]
+
-
[[Category: Filament]]
+
-
[[Category: Gtp]]
+
-
[[Category: Structural protein]]
+
-
[[Category: Tubulin]]
+

Current revision

Odinarchaeota tubulin (OdinTubulin) H393D mutant, in a protofilament arrangement, bound to 79% GTP, 21% GDP, Na+, Mg2+

PDB ID 7evi

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools