2yfd

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:51, 20 December 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2yfd' size='340' side='right'caption='[[2yfd]], [[Resolution|resolution]] 1.77&Aring;' scene=''>
<StructureSection load='2yfd' size='340' side='right'caption='[[2yfd]], [[Resolution|resolution]] 1.77&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2yfd]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Deira Deira]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YFD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YFD FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2yfd]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Deinococcus_radiodurans_R1 Deinococcus radiodurans R1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YFD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YFD FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UMP:2-DEOXYURIDINE+5-MONOPHOSPHATE'>UMP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.767&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2yfc|2yfc]], [[2yf3|2yf3]], [[2yeu|2yeu]], [[2yf9|2yf9]], [[2yf4|2yf4]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UMP:2-DEOXYURIDINE+5-MONOPHOSPHATE'>UMP</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Nucleoside-triphosphate_diphosphatase Nucleoside-triphosphate diphosphatase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.1.19 3.6.1.19] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yfd OCA], [https://pdbe.org/2yfd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yfd RCSB], [https://www.ebi.ac.uk/pdbsum/2yfd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yfd ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yfd OCA], [https://pdbe.org/2yfd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yfd RCSB], [https://www.ebi.ac.uk/pdbsum/2yfd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yfd ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9RS96_DEIRA Q9RS96_DEIRA]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Deira]]
+
[[Category: Deinococcus radiodurans R1]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Nucleoside-triphosphate diphosphatase]]
+
[[Category: De Sanctis D]]
-
[[Category: Goncalves, A M.D]]
+
[[Category: Goncalves AMD]]
-
[[Category: Mcsweeney, S M]]
+
[[Category: Mcsweeney SM]]
-
[[Category: Sanctis, D De]]
+
-
[[Category: Dimeric dutpase]]
+
-
[[Category: Hydrolase]]
+

Current revision

STRUCTURAL AND FUNCTIONAL INSIGHTS OF DR2231 PROTEIN, THE MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE FROM DEINOCOCCUS RADIODURANS, COMPLEXED WITH Mg and dUMP

PDB ID 2yfd

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2yfd"
Personal tools