3rr3

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Current revision (08:08, 9 October 2024) (edit) (undo)
 
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<StructureSection load='3rr3' size='340' side='right'caption='[[3rr3]], [[Resolution|resolution]] 2.84&Aring;' scene=''>
<StructureSection load='3rr3' size='340' side='right'caption='[[3rr3]], [[Resolution|resolution]] 2.84&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3rr3]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RR3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RR3 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3rr3]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RR3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RR3 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene>, <scene name='pdbligand=FLR:(2R)-2-(3-FLUORO-4-PHENYL-PHENYL)PROPANOIC+ACID'>FLR</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.842&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Ptgs2, Cox-2, Cox2, Pghs-b, Tis10 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene>, <scene name='pdbligand=FLR:(2R)-2-(3-FLUORO-4-PHENYL-PHENYL)PROPANOIC+ACID'>FLR</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Prostaglandin-endoperoxide_synthase Prostaglandin-endoperoxide synthase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.14.99.1 1.14.99.1] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3rr3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rr3 OCA], [https://pdbe.org/3rr3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3rr3 RCSB], [https://www.ebi.ac.uk/pdbsum/3rr3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3rr3 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3rr3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rr3 OCA], [https://pdbe.org/3rr3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3rr3 RCSB], [https://www.ebi.ac.uk/pdbsum/3rr3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3rr3 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/PGH2_MOUSE PGH2_MOUSE]] Mediates the formation of prostaglandins from arachidonate. May have a role as a major mediator of inflammation and/or a role for prostanoid signaling in activity-dependent plasticity.<ref>PMID:12925531</ref> <ref>PMID:20463020</ref> <ref>PMID:20810665</ref> <ref>PMID:21489986</ref>
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[https://www.uniprot.org/uniprot/PGH2_MOUSE PGH2_MOUSE] Mediates the formation of prostaglandins from arachidonate. May have a role as a major mediator of inflammation and/or a role for prostanoid signaling in activity-dependent plasticity.<ref>PMID:12925531</ref> <ref>PMID:20463020</ref> <ref>PMID:20810665</ref> <ref>PMID:21489986</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Lk3 transgenic mice]]
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[[Category: Mus musculus]]
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[[Category: Prostaglandin-endoperoxide synthase]]
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[[Category: Banerjee S]]
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[[Category: Banerjee, S]]
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[[Category: Carter BD]]
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[[Category: Carter, B D]]
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[[Category: Duggan KC]]
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[[Category: Duggan, K C]]
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[[Category: Hermanson DJ]]
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[[Category: Hermanson, D J]]
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[[Category: Marnett LJ]]
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[[Category: Marnett, L J]]
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[[Category: Musee J]]
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[[Category: Musee, J]]
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[[Category: Oates JA]]
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[[Category: Oates, J A]]
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[[Category: Prusakiewicz JJ]]
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[[Category: Prusakiewicz, J J]]
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[[Category: Scheib J]]
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[[Category: Scheib, J]]
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[[Category: Flurbiprofen]]
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[[Category: Oxidoreductase-oxidoreductase inhibitor complex]]
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Current revision

Structure of (R)-flurbiprofen bound to mCOX-2

PDB ID 3rr3

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OCA

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