This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3s8h

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (17:23, 1 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3s8h' size='340' side='right'caption='[[3s8h]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
<StructureSection load='3s8h' size='340' side='right'caption='[[3s8h]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3s8h]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_aeruginosus"_(schroeter_1872)_trevisan_1885 "bacillus aeruginosus" (schroeter 1872) trevisan 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3S8H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3S8H FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3s8h]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3S8H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3S8H FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3OH:3-HYDROXY-PROPANOIC+ACID'>3OH</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3puo|3puo]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3OH:3-HYDROXY-PROPANOIC+ACID'>3OH</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">dapA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 "Bacillus aeruginosus" (Schroeter 1872) Trevisan 1885])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/4-hydroxy-tetrahydrodipicolinate_synthase 4-hydroxy-tetrahydrodipicolinate synthase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.3.3.7 4.3.3.7] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3s8h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3s8h OCA], [https://pdbe.org/3s8h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3s8h RCSB], [https://www.ebi.ac.uk/pdbsum/3s8h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3s8h ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3s8h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3s8h OCA], [https://pdbe.org/3s8h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3s8h RCSB], [https://www.ebi.ac.uk/pdbsum/3s8h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3s8h ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/DAPA_PSEAE DAPA_PSEAE]] Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).<ref>PMID:21396954</ref>
+
[https://www.uniprot.org/uniprot/DAPA_PSEAE DAPA_PSEAE] Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).<ref>PMID:21396954</ref>
==See Also==
==See Also==
Line 19: Line 17:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: 4-hydroxy-tetrahydrodipicolinate synthase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Kaur, N]]
+
[[Category: Pseudomonas aeruginosa]]
-
[[Category: Kaur, P]]
+
[[Category: Kaur N]]
-
[[Category: Kumar, M]]
+
[[Category: Kaur P]]
-
[[Category: Kumar, S]]
+
[[Category: Kumar M]]
-
[[Category: Sharma, S]]
+
[[Category: Kumar S]]
-
[[Category: Singh, T P]]
+
[[Category: Sharma S]]
-
[[Category: Sinha, M]]
+
[[Category: Singh TP]]
-
[[Category: 3-hydroxypropanoic acid]]
+
[[Category: Sinha M]]
-
[[Category: Biosynthesis]]
+
-
[[Category: Lyase]]
+
-
[[Category: Lysine]]
+

Current revision

Structure of dihydrodipicolinate synthase complexed with 3-Hydroxypropanoic acid(HPA)at 2.70 A resolution

PDB ID 3s8h

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools