7ayy
From Proteopedia
(Difference between revisions)
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==Structure of the human 8-oxoguanine DNA Glycosylase hOGG1 in complex with activator TH10785== | ==Structure of the human 8-oxoguanine DNA Glycosylase hOGG1 in complex with activator TH10785== | ||
| - | <StructureSection load='7ayy' size='340' side='right'caption='[[7ayy]]' scene=''> | + | <StructureSection load='7ayy' size='340' side='right'caption='[[7ayy]], [[Resolution|resolution]] 2.00Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7AYY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7AYY FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7ayy]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7AYY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7AYY FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ayy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ayy OCA], [https://pdbe.org/7ayy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ayy RCSB], [https://www.ebi.ac.uk/pdbsum/7ayy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ayy ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=SEQ:~{N}-cyclohexyl-2-cyclopropyl-quinazolin-4-amine'>SEQ</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7ayy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7ayy OCA], [https://pdbe.org/7ayy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7ayy RCSB], [https://www.ebi.ac.uk/pdbsum/7ayy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7ayy ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Disease == | ||
| + | [[https://www.uniprot.org/uniprot/OGG1_HUMAN OGG1_HUMAN]] Defects in OGG1 may be a cause of renal cell carcinoma (RCC) [MIM:[https://omim.org/entry/144700 144700]]. It is a heterogeneous group of sporadic or hereditary carcinoma derived from cells of the proximal renal tubular epithelium. It is subclassified into clear cell renal carcinoma (non-papillary carcinoma), papillary renal cell carcinoma, chromophobe renal cell carcinoma, collecting duct carcinoma with medullary carcinoma of the kidney, and unclassified renal cell carcinoma. | ||
| + | == Function == | ||
| + | [[https://www.uniprot.org/uniprot/OGG1_HUMAN OGG1_HUMAN]] DNA repair enzyme that incises DNA at 8-oxoG residues. Excises 7,8-dihydro-8-oxoguanine and 2,6-diamino-4-hydroxy-5-N-methylformamidopyrimidine (FAPY) from damaged DNA. Has a beta-lyase activity that nicks DNA 3' to the lesion. | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Homo sapiens]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Davies JR]] | [[Category: Davies JR]] | ||
[[Category: Masuyer G]] | [[Category: Masuyer G]] | ||
[[Category: Stenmark P]] | [[Category: Stenmark P]] | ||
Revision as of 07:12, 8 September 2022
Structure of the human 8-oxoguanine DNA Glycosylase hOGG1 in complex with activator TH10785
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