3u58

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:17, 1 March 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3u58' size='340' side='right'caption='[[3u58]], [[Resolution|resolution]] 2.61&Aring;' scene=''>
<StructureSection load='3u58' size='340' side='right'caption='[[3u58]], [[Resolution|resolution]] 2.61&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3u58]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Tetth Tetth]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U58 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3U58 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3u58]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Tetrahymena_thermophila Tetrahymena thermophila] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U58 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3U58 FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3u4v|3u4v]], [[3u4z|3u4z]], [[3u50|3u50]]</div></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.613&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3u58 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3u58 OCA], [https://pdbe.org/3u58 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3u58 RCSB], [https://www.ebi.ac.uk/pdbsum/3u58 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3u58 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3u58 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3u58 OCA], [https://pdbe.org/3u58 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3u58 RCSB], [https://www.ebi.ac.uk/pdbsum/3u58 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3u58 ProSAT]</span></td></tr>
</table>
</table>
-
<div style="background-color:#fffaf0;">
 
-
== Publication Abstract from PubMed ==
 
-
Telomerase copies its internal RNA template to synthesize telomeric DNA repeats. Unlike other polymerases, telomerase can retain its single-stranded product through multiple rounds of template dissociation and repositioning to accomplish repeat addition processivity (RAP). Tetrahymena telomerase holoenzyme RAP depends on a subunit, Teb1, with autonomous DNA-binding activity. Sequence homology and domain modeling suggest that Teb1 is a paralog of RPA70C, the largest subunit of the single-stranded DNA-binding factor replication protein (RPA), but unlike RPA, Teb1 binds DNA with high specificity for telomeric repeats. To understand the structural basis and significance of telomeric-repeat DNA recognition by Teb1, we solved crystal structures of three proposed Teb1 DNA-binding domains and defined amino acids of each domain that contribute to DNA interaction. Our studies indicate that two central Teb1 DNA-binding oligonucleotide/oligosaccharide-binding-fold domains, Teb1A and Teb1B, achieve high affinity and selectivity of telomeric-repeat recognition by principles similar to the telomere end-capping protein POT1 (protection of telomeres 1). An additional C-terminal Teb1 oligonucleotide/oligosaccharide-binding-fold domain, Teb1C, has features shared with the RPA70 C-terminal domain including a putative direct DNA-binding surface that is critical for high-RAP activity of reconstituted holoenzyme. The Teb1C zinc ribbon motif does not contribute to DNA binding but is nonetheless required for high-RAP activity, perhaps contributing to Teb1 physical association with the remainder of the holoenzyme. Our results suggest the biological model that high-affinity DNA binding by Teb1AB recruits holoenzyme to telomeres and subsequent Teb1C-DNA association traps product in a sliding-clamp-like manner that does not require high-affinity DNA binding for high stability of enzyme-product association.
 
- 
-
Structural basis for Tetrahymena telomerase processivity factor Teb1 binding to single-stranded telomeric-repeat DNA.,Zeng Z, Min B, Huang J, Hong K, Yang Y, Collins K, Lei M Proc Natl Acad Sci U S A. 2011 Dec 20;108(51):20357-61. Epub 2011 Dec 5. PMID:22143754<ref>PMID:22143754</ref>
 
- 
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
-
</div>
 
-
<div class="pdbe-citations 3u58" style="background-color:#fffaf0;"></div>
 
-
== References ==
 
-
<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Tetth]]
+
[[Category: Synthetic construct]]
-
[[Category: Huang, J]]
+
[[Category: Tetrahymena thermophila]]
-
[[Category: Lei, M]]
+
[[Category: Huang J]]
-
[[Category: Yang, Y]]
+
[[Category: Lei M]]
-
[[Category: Zeng, Z]]
+
[[Category: Yang Y]]
-
[[Category: Dna binding protein-dna complex]]
+
[[Category: Zeng Z]]
-
[[Category: Processivity factor]]
+
-
[[Category: Teb1]]
+
-
[[Category: Telomerase]]
+
-
[[Category: Tetrahymena]]
+

Current revision

Crystal Structure of the Tetrahymena telomerase processivity factor Teb1 AB

PDB ID 3u58

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools