This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3ufm
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
<StructureSection load='3ufm' size='340' side='right'caption='[[3ufm]], [[Resolution|resolution]] 1.95Å' scene=''> | <StructureSection load='3ufm' size='340' side='right'caption='[[3ufm]], [[Resolution|resolution]] 1.95Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3ufm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3ufm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans] and [https://en.wikipedia.org/wiki/Deinococcus_radiodurans_R1 Deinococcus radiodurans R1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UFM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3UFM FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr> | |
| - | <tr id=' | + | |
| - | + | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ufm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ufm OCA], [https://pdbe.org/3ufm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ufm RCSB], [https://www.ebi.ac.uk/pdbsum/3ufm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ufm ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ufm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ufm OCA], [https://pdbe.org/3ufm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ufm RCSB], [https://www.ebi.ac.uk/pdbsum/3ufm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ufm ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | + | [https://www.uniprot.org/uniprot/UNG_DEIRA UNG_DEIRA] Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (By similarity). | |
==See Also== | ==See Also== | ||
| Line 18: | Line 16: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Deinococcus radiodurans]] |
| + | [[Category: Deinococcus radiodurans R1]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | + | [[Category: George NP]] | |
| - | [[Category: George | + | [[Category: Keck JL]] |
| - | [[Category: Keck | + | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Co-crystal structure of Deinococcus radiodurans uracil-DNA glycosylase and the C-terminus of the single-stranded DNA-binding protein
| |||||||||||
