7q1r

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==A de novo designed homo-dimeric antiparallel coiled coil apCC-Di==
==A de novo designed homo-dimeric antiparallel coiled coil apCC-Di==
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<StructureSection load='7q1r' size='340' side='right'caption='[[7q1r]]' scene=''>
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<StructureSection load='7q1r' size='340' side='right'caption='[[7q1r]], [[Resolution|resolution]] 1.08&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7Q1R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7Q1R FirstGlance]. <br>
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<table><tr><td colspan='2'>[[7q1r]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7Q1R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7Q1R FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7q1r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7q1r OCA], [https://pdbe.org/7q1r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7q1r RCSB], [https://www.ebi.ac.uk/pdbsum/7q1r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7q1r ProSAT]</span></td></tr>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EOH:ETHANOL'>EOH</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7q1r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7q1r OCA], [https://pdbe.org/7q1r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7q1r RCSB], [https://www.ebi.ac.uk/pdbsum/7q1r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7q1r ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Increasingly, it is possible to design peptide and protein assemblies de novo from first principles or computationally. This approach provides new routes to functional synthetic polypeptides, including designs to target and bind proteins of interest. Much of this work has been developed in vitro. Therefore, a challenge is to deliver de novo polypeptides efficiently to sites of action within cells. Here we describe the design, characterisation, intracellular delivery, and subcellular localisation of a de novo synthetic peptide system. This system comprises a dual-function basic peptide, programmed both for cell penetration and target binding, and a complementary acidic peptide that can be fused to proteins of interest and introduced into cells using synthetic DNA. The designs are characterised in vitro using biophysical methods and X-ray crystallography. The utility of the system for delivery into mammalian cells and subcellular targeting is demonstrated by marking organelles and actively engaging functional protein complexes.
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De novo designed peptides for cellular delivery and subcellular localisation.,Rhys GG, Cross JA, Dawson WM, Thompson HF, Shanmugaratnam S, Savery NJ, Dodding MP, Hocker B, Woolfson DN Nat Chem Biol. 2022 Jul 14. pii: 10.1038/s41589-022-01076-6. doi:, 10.1038/s41589-022-01076-6. PMID:35836017<ref>PMID:35836017</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 7q1r" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Dawson WM]]
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[[Category: Dawson, W M]]
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[[Category: Hocker B]]
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[[Category: Hocker, B]]
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[[Category: Rhys GG]]
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[[Category: Rhys, G G]]
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[[Category: Shanmugaratnam S]]
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[[Category: Shanmugaratnam, S]]
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[[Category: Woolfson DN]]
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[[Category: Woolfson, D N]]
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[[Category: Antiparallel]]
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[[Category: Associating peptide]]
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[[Category: Coiled-coil]]
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[[Category: De novo]]
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[[Category: De novo protein]]
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[[Category: Homo-dimeric]]
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[[Category: Protein design]]

Revision as of 18:15, 27 July 2022

A de novo designed homo-dimeric antiparallel coiled coil apCC-Di

PDB ID 7q1r

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