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3v7j
From Proteopedia
(Difference between revisions)
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<StructureSection load='3v7j' size='340' side='right'caption='[[3v7j]], [[Resolution|resolution]] 2.25Å' scene=''> | <StructureSection load='3v7j' size='340' side='right'caption='[[3v7j]], [[Resolution|resolution]] 2.25Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3v7j]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3v7j]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V7J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3V7J FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> |
| - | + | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3v7j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3v7j OCA], [https://pdbe.org/3v7j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3v7j RCSB], [https://www.ebi.ac.uk/pdbsum/3v7j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3v7j ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3v7j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3v7j OCA], [https://pdbe.org/3v7j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3v7j RCSB], [https://www.ebi.ac.uk/pdbsum/3v7j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3v7j ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | + | [https://www.uniprot.org/uniprot/DPOLB_RAT DPOLB_RAT] Repair polymerase that plays a key role in base-excision repair. Has 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity that removes the 5' sugar phosphate and also acts as a DNA polymerase that adds one nucleotide to the 3' end of the arising single-nucleotide gap. Conducts 'gap-filling' DNA synthesis in a stepwise distributive fashion rather than in a processive fashion as for other DNA polymerases. | |
| + | |||
| + | ==See Also== | ||
| + | *[[DNA polymerase 3D structures|DNA polymerase 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Buffalo rat]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: | + | [[Category: Rattus norvegicus]] |
| - | [[Category: | + | [[Category: Jaeger J]] |
| - | [[Category: | + | [[Category: Rangarajan S]] |
| - | + | ||
| - | + | ||
Current revision
Co-crystal structure of Wild Type Rat polymerase beta: Enzyme-DNA binary complex
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