1hrt

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:1hrt.gif|left|200px]]
+
{{Seed}}
 +
[[Image:1hrt.png|left|200px]]
<!--
<!--
Line 9: Line 10:
{{STRUCTURE_1hrt| PDB=1hrt | SCENE= }}
{{STRUCTURE_1hrt| PDB=1hrt | SCENE= }}
-
'''THE STRUCTURE OF A COMPLEX OF BOVINE ALPHA-THROMBIN AND RECOMBINANT HIRUDIN AT 2.8 ANGSTROMS RESOLUTION'''
+
===THE STRUCTURE OF A COMPLEX OF BOVINE ALPHA-THROMBIN AND RECOMBINANT HIRUDIN AT 2.8 ANGSTROMS RESOLUTION===
-
==Overview==
+
<!--
-
Crystals of the complex of bovine alpha-thrombin with recombinant hirudin variant 1 have space group C222(1) with cell constants a = 59.11, b = 102.62, and c = 143.26 A. The orientation and position of the thrombin component was determined by molecular replacement and the hirudin molecule was fit in 2 magnitude of Fo - magnitude of Fc electron density maps. The structure was refined by restrained least squares and simulated annealing to R = 0.161 at 2.8-A resolution. The binding of hirudin to thrombin is generally similar to that observed in the crystals of human thrombin-hirudin. Several differences in the interactions of the COOH-terminal polypeptide of hirudin, specifically of residues Asp-55h, Phe-56h, Glu-57h, and Glu-58h, and a few differences in the interactions of the hirudin core, specifically of residues Asp-5h, Ser-19h, and Asn-20h, with thrombin from human thrombin-hirudin suggest that there is some flexibility in the binding of these 2 molecules. Most of the residues in the 9 subsites that bind fibrinopeptide A7-16 to thrombin also interact with the NH2-terminal domain of hirudin. The S1 subsite is a notable exception in that only 1 of its 6 residues, namely Ser-214, interacts with hirudin. The only difference between human and bovine thrombins that appears to influence the binding of hirudin is the replacement of Lys-149E by an acidic glutamate in the bovine enzyme.
+
The line below this paragraph, {{ABSTRACT_PUBMED_1517214}}, adds the Publication Abstract to the page
 +
(as it appears on PubMed at http://www.pubmed.gov), where 1517214 is the PubMed ID number.
 +
-->
 +
{{ABSTRACT_PUBMED_1517214}}
==About this Structure==
==About this Structure==
Line 26: Line 30:
[[Category: Edwards, B F.P.]]
[[Category: Edwards, B F.P.]]
[[Category: Vitali, J.]]
[[Category: Vitali, J.]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 19:10:15 2008''
+
 
 +
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 1 08:35:58 2008''

Revision as of 05:36, 1 July 2008

Image:1hrt.png

Template:STRUCTURE 1hrt

THE STRUCTURE OF A COMPLEX OF BOVINE ALPHA-THROMBIN AND RECOMBINANT HIRUDIN AT 2.8 ANGSTROMS RESOLUTION

Template:ABSTRACT PUBMED 1517214

About this Structure

1HRT is a Protein complex structure of sequences from Bos taurus and Hirudo medicinalis. Full crystallographic information is available from OCA.

Reference

The structure of a complex of bovine alpha-thrombin and recombinant hirudin at 2.8-A resolution., Vitali J, Martin PD, Malkowski MG, Robertson WD, Lazar JB, Winant RC, Johnson PH, Edwards BF, J Biol Chem. 1992 Sep 5;267(25):17670-8. PMID:1517214

Page seeded by OCA on Tue Jul 1 08:35:58 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1hrt"
Personal tools