3vdn
From Proteopedia
(Difference between revisions)
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<StructureSection load='3vdn' size='340' side='right'caption='[[3vdn]], [[Resolution|resolution]] 2.55Å' scene=''> | <StructureSection load='3vdn' size='340' side='right'caption='[[3vdn]], [[Resolution|resolution]] 2.55Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3vdn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[3vdn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_hygroscopicus_subsp._limoneus Streptomyces hygroscopicus subsp. limoneus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VDN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VDN FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.55Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene></td></tr> |
| - | + | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vdn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vdn OCA], [https://pdbe.org/3vdn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vdn RCSB], [https://www.ebi.ac.uk/pdbsum/3vdn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vdn ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vdn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vdn OCA], [https://pdbe.org/3vdn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vdn RCSB], [https://www.ebi.ac.uk/pdbsum/3vdn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vdn ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/VLDE_STRHL VLDE_STRHL] Involved in the biosynthesis of the antifungal agent validamycin A (PubMed:16725283). Catalyzes the condensation between GDP-valienol and validamine 7-phosphate via a nonglycosidic C-N bond formation to yield validoxylamine A 7'-phosphate (PubMed:21766819).<ref>PMID:16725283</ref> <ref>PMID:21766819</ref> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Glycosyltransferase 3D structures|Glycosyltransferase 3D structures]] | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Streptomyces hygroscopicus subsp. limoneus shibata et al. 1973]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Asamizu | + | [[Category: Streptomyces hygroscopicus subsp. limoneus]] |
| - | [[Category: Cavalier | + | [[Category: Asamizu S]] |
| - | [[Category: Lee | + | [[Category: Cavalier MC]] |
| - | [[Category: Mahmud | + | [[Category: Lee Y-H]] |
| - | [[Category: Neau | + | [[Category: Mahmud T]] |
| - | [[Category: Yim | + | [[Category: Neau D]] |
| - | + | [[Category: Yim Y-S]] | |
| - | + | ||
Current revision
Crystal Structure of VldE, the pseudo-glycosyltransferase, in complex with GDP
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