This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3vjc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:23, 8 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='3vjc' size='340' side='right'caption='[[3vjc]], [[Resolution|resolution]] 1.89&Aring;' scene=''>
<StructureSection load='3vjc' size='340' side='right'caption='[[3vjc]], [[Resolution|resolution]] 1.89&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3vjc]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VJC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VJC FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3vjc]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VJC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VJC FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=ZGA:ZARAGOZIC+ACID+A'>ZGA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.89&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3vj8|3vj8]], [[3vj9|3vj9]], [[3vja|3vja]], [[3vjb|3vjb]], [[3vjd|3vjd]], [[3vje|3vje]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=ZGA:ZARAGOZIC+ACID+A'>ZGA</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">FDFT1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Squalene_synthase Squalene synthase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.21 2.5.1.21] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vjc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vjc OCA], [https://pdbe.org/3vjc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vjc RCSB], [https://www.ebi.ac.uk/pdbsum/3vjc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vjc ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vjc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vjc OCA], [https://pdbe.org/3vjc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vjc RCSB], [https://www.ebi.ac.uk/pdbsum/3vjc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vjc ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/FDFT_HUMAN FDFT_HUMAN]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 26: Line 26:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human]]
+
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Squalene synthase]]
+
[[Category: Chang WJ]]
-
[[Category: Chang, W J]]
+
[[Category: Jeng WY]]
-
[[Category: Jeng, W Y]]
+
[[Category: Ko TP]]
-
[[Category: Ko, T P]]
+
[[Category: Liu CI]]
-
[[Category: Liu, C I]]
+
[[Category: Wang AHJ]]
-
[[Category: Wang, A H.J]]
+
-
[[Category: Cholesterol biosynthesis]]
+
-
[[Category: Farnesyl-diphosphate farnesyltransferase]]
+
-
[[Category: Head-to-head synthase]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Transferase-transferase inhibitor complex]]
+

Current revision

Crystal structure of the human squalene synthase in complex with zaragozic acid A

PDB ID 3vjc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools