3vmw

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Current revision (12:27, 8 November 2023) (edit) (undo)
 
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<StructureSection load='3vmw' size='340' side='right'caption='[[3vmw]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='3vmw' size='340' side='right'caption='[[3vmw]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3vmw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_sp._n16-5 Bacillus sp. n16-5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VMW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VMW FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3vmw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_sp._N16-5 Bacillus sp. N16-5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VMW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VMW FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ADA:ALPHA-D-GALACTOPYRANURONIC+ACID'>ADA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3vmv|3vmv]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADA:ALPHA-D-GALACTOPYRANURONIC+ACID'>ADA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GU088530, pelA ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=122631 Bacillus sp. N16-5])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Pectate_lyase Pectate lyase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.2.2 4.2.2.2] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vmw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vmw OCA], [https://pdbe.org/3vmw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vmw RCSB], [https://www.ebi.ac.uk/pdbsum/3vmw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vmw ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vmw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vmw OCA], [https://pdbe.org/3vmw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vmw RCSB], [https://www.ebi.ac.uk/pdbsum/3vmw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vmw ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/D0VP31_9BACI D0VP31_9BACI]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bacillus sp. n16-5]]
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[[Category: Bacillus sp. N16-5]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Pectate lyase]]
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[[Category: Guo RT]]
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[[Category: Guo, R T]]
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[[Category: Huang CH]]
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[[Category: Huang, C H]]
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[[Category: Ko TP]]
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[[Category: Ko, T P]]
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[[Category: Liu W]]
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[[Category: Liu, W]]
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[[Category: Ma Y]]
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[[Category: Ma, Y]]
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[[Category: Xue Y]]
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[[Category: Xue, Y]]
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[[Category: Zhang G]]
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[[Category: Zhang, G]]
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[[Category: Zheng Y]]
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[[Category: Zheng, Y]]
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[[Category: Zhou C]]
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[[Category: Zhou, C]]
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[[Category: Beta-helix]]
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[[Category: Lyase]]
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[[Category: Pectolytic]]
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[[Category: Polygalacturonate]]
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[[Category: Polysaccharide lyase family 1]]
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Current revision

Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate

PDB ID 3vmw

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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