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3vyt

From Proteopedia

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Current revision (12:42, 8 November 2023) (edit) (undo)
 
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<StructureSection load='3vyt' size='340' side='right'caption='[[3vyt]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
<StructureSection load='3vyt' size='340' side='right'caption='[[3vyt]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3vyt]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_kodakaraensis_(strain_kod1) Pyrococcus kodakaraensis (strain kod1)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VYT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VYT FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3vyt]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermococcus_kodakarensis_KOD1 Thermococcus kodakarensis KOD1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VYT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VYT FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2z1c|2z1c]], [[2z1d|2z1d]], [[2z1e|2z1e]], [[3vyr|3vyr]], [[3vys|3vys]], [[3vyu|3vyu]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Tk-hypC ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=69014 Pyrococcus kodakaraensis (strain KOD1)]), Tk-hypD ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=69014 Pyrococcus kodakaraensis (strain KOD1)]), TK1993 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=69014 Pyrococcus kodakaraensis (strain KOD1)])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vyt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vyt OCA], [https://pdbe.org/3vyt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vyt RCSB], [https://www.ebi.ac.uk/pdbsum/3vyt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vyt ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vyt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vyt OCA], [https://pdbe.org/3vyt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vyt RCSB], [https://www.ebi.ac.uk/pdbsum/3vyt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vyt ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q5JII0_THEKO Q5JII0_THEKO]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Miki, K]]
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[[Category: Thermococcus kodakarensis KOD1]]
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[[Category: Watanabe, S]]
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[[Category: Miki K]]
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[[Category: Metal binding protein-transferase complex]]
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[[Category: Watanabe S]]

Current revision

Crystal structure of the HypC-HypD-HypE complex (form I inward)

PDB ID 3vyt

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