FirstGlance/Virus Capsids and Other Large Assemblies
From Proteopedia
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Virus capsids and similarly large protein assemblies can be conveniently visualized and analyzed with [[FirstGlance in Jmol]]. Below some examples are explained and illustrated, but here is a '''quick start''': [http://bioinformatics.org/firstglance/fgij4/fg.htm?mol=1pov polio virus capsid in FirstGlance] ([[1pov]]). | Virus capsids and similarly large protein assemblies can be conveniently visualized and analyzed with [[FirstGlance in Jmol]]. Below some examples are explained and illustrated, but here is a '''quick start''': [http://bioinformatics.org/firstglance/fgij4/fg.htm?mol=1pov polio virus capsid in FirstGlance] ([[1pov]]). | ||
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| + | FirstGlance in Jmol automatically constructs [[biological unit]] 1, thought to be the major functional quaternary assembly. When the resulting assembly is too large to work smoothly and efficiently in FirstGlance in Jmol (all Javascript), FirstGlance will automatically '''simplify''' the model to alpha carbons, or when necessary, to a subset of alpha carbons. | ||
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Revision as of 21:42, 27 July 2022
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