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3wjd

From Proteopedia

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Current revision (08:45, 20 March 2024) (edit) (undo)
 
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<StructureSection load='3wjd' size='340' side='right'caption='[[3wjd]], [[Resolution|resolution]] 1.10&Aring;' scene=''>
<StructureSection load='3wjd' size='340' side='right'caption='[[3wjd]], [[Resolution|resolution]] 1.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3wjd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WJD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WJD FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3wjd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WJD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3WJD FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.1&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3wjb|3wjb]], [[3wjc|3wjc]], [[3wje|3wje]], [[3wjf|3wjf]], [[3wjg|3wjg]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">At1g79260, At1g79260.1, YUP8H12R.14 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wjd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wjd OCA], [https://pdbe.org/3wjd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wjd RCSB], [https://www.ebi.ac.uk/pdbsum/3wjd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wjd ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3wjd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wjd OCA], [https://pdbe.org/3wjd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3wjd RCSB], [https://www.ebi.ac.uk/pdbsum/3wjd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3wjd ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/Y1926_ARATH Y1926_ARATH]] May play a role in the intracellular transport of hydrophobic ligands (Potential).
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[https://www.uniprot.org/uniprot/NB_ARATH NB_ARATH] Heme-binding protein able to scavenge peroxynitrite and to protect free L-tyrosine against peroxynitrite-mediated nitration, by acting as a peroxynitrite isomerase that converts peroxynitrite to nitrate. Therefore, this protein likely plays a role in peroxynitrite sensing and in the detoxification of reactive nitrogen and oxygen species (RNS and ROS, respectively) (PubMed:32295384). Is able to bind nitric oxide (NO) in vitro, but may act as a sensor of peroxynitrite levels in vivo (PubMed:32295384, PubMed:19938152).<ref>PMID:19938152</ref> <ref>PMID:32295384</ref>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Arath]]
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[[Category: Arabidopsis thaliana]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Arlt, M]]
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[[Category: Arlt M]]
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[[Category: Bocola, M]]
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[[Category: Bocola M]]
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[[Category: Fukumoto, K]]
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[[Category: Fukumoto K]]
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[[Category: Hayashi, T]]
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[[Category: Hayashi T]]
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[[Category: Inoue, T]]
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[[Category: Inoue T]]
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[[Category: Mizohata, E]]
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[[Category: Mizohata E]]
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[[Category: Onoda, A]]
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[[Category: Onoda A]]
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[[Category: Schwaneberg, U]]
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[[Category: Schwaneberg U]]
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[[Category: Beta-barrel]]
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[[Category: Hydrophobic ligand]]
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[[Category: Intracellular transport]]
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[[Category: Transport protein]]
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Current revision

Crystal structure of mutant nitrobindin F44W/M75L/H76L/Q96C/M148L/H158L (NB5) from Arabidopsis thaliana

PDB ID 3wjd

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