402d
From Proteopedia
(Difference between revisions)
Line 4: | Line 4: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[402d]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=402D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=402D FirstGlance]. <br> | <table><tr><td colspan='2'>[[402d]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=402D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=402D FirstGlance]. <br> | ||
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=402d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=402d OCA], [https://pdbe.org/402d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=402d RCSB], [https://www.ebi.ac.uk/pdbsum/402d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=402d ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> |
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=402d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=402d OCA], [https://pdbe.org/402d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=402d RCSB], [https://www.ebi.ac.uk/pdbsum/402d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=402d ProSAT]</span></td></tr> | ||
</table> | </table> | ||
- | <div style="background-color:#fffaf0;"> | ||
- | == Publication Abstract from PubMed == | ||
- | The crystal structure of the RNA octamer 5'-CGC(CA)GCG-3' has been determined from X-ray diffraction data to 2.3 A resolution. In the crystal, this oligomer forms a self-complementary double helix in the asymmetric unit. Tandem non-Watson-Crick C-A and A-C base pairs comprise an internal loop in the middle of the duplex, which is incorporated with little distortion of the A-form double helix. From the geometry of the C-A base pairs, it is inferred that the adenosine imino group is protonated and donates a hydrogen bond to the carbonyl group of the cytosine. The wobble geometry of the C-A+ base pairs is very similar to that of the common U-G non-Watson-Crick pair. | ||
- | |||
- | Structure of an RNA internal loop consisting of tandem C-A+ base pairs.,Jang SB, Hung LW, Chi YI, Holbrook EL, Carter RJ, Holbrook SR Biochemistry. 1998 Aug 25;37(34):11726-31. PMID:9718295<ref>PMID:9718295</ref> | ||
- | |||
- | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
- | </div> | ||
- | <div class="pdbe-citations 402d" style="background-color:#fffaf0;"></div> | ||
- | == References == | ||
- | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Carter | + | [[Category: Carter R]] |
- | [[Category: Chi | + | [[Category: Chi Y-I]] |
- | [[Category: Holbrook | + | [[Category: Holbrook EL]] |
- | [[Category: Holbrook | + | [[Category: Holbrook SR]] |
- | [[Category: Hung | + | [[Category: Hung L-W]] |
- | [[Category: Jang | + | [[Category: Jang SB]] |
- | + | ||
- | + | ||
- | + |
Current revision
5'-R(*CP*GP*CP*CP*AP*GP*CP*G)-3'
|
Categories: Large Structures | Carter R | Chi Y-I | Holbrook EL | Holbrook SR | Hung L-W | Jang SB