This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4a6s

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:20, 20 December 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='4a6s' size='340' side='right'caption='[[4a6s]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
<StructureSection load='4a6s' size='340' side='right'caption='[[4a6s]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4a6s]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseae Pseae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4A6S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4A6S FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4a6s]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4A6S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4A6S FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GS9:NAPHTHALEN-2-YL+1-THIO-BETA-D-GALACTOPYRANOSIDE'>GS9</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1uoj|1uoj]], [[1l7l|1l7l]], [[2vxj|2vxj]], [[1oko|1oko]], [[3zyh|3zyh]], [[2wyf|2wyf]], [[3zyb|3zyb]], [[3zyf|3zyf]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GS9:NAPHTHALEN-2-YL+1-THIO-BETA-D-GALACTOPYRANOSIDE'>GS9</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4a6s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4a6s OCA], [https://pdbe.org/4a6s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4a6s RCSB], [https://www.ebi.ac.uk/pdbsum/4a6s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4a6s ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4a6s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4a6s OCA], [https://pdbe.org/4a6s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4a6s RCSB], [https://www.ebi.ac.uk/pdbsum/4a6s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4a6s ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/PA1L_PSEAE PA1L_PSEAE]] D-galactose specific lectin. Binds in decreasing order of affinity: melibiose, methyl-alpha-D-galactoside, D-galactose, methyl-beta-D-galactoside, N-acetyl-D-galactosamine. Similar to plant lectins in its selective (carbohydrate-specific) hemagglutinating activity.
+
[https://www.uniprot.org/uniprot/PA1L_PSEAE PA1L_PSEAE] D-galactose specific lectin. Binds in decreasing order of affinity: melibiose, methyl-alpha-D-galactoside, D-galactose, methyl-beta-D-galactoside, N-acetyl-D-galactosamine. Similar to plant lectins in its selective (carbohydrate-specific) hemagglutinating activity.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 27: Line 27:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Pseae]]
+
[[Category: Pseudomonas aeruginosa PAO1]]
-
[[Category: Blanchard, B]]
+
[[Category: Blanchard B]]
-
[[Category: Chiao, T S]]
+
[[Category: Chiao TS]]
-
[[Category: Ganne, G]]
+
[[Category: Ganne G]]
-
[[Category: Giguere, D]]
+
[[Category: Giguere D]]
-
[[Category: Imberty, A]]
+
[[Category: Imberty A]]
-
[[Category: Rodrigue, J]]
+
[[Category: Rodrigue J]]
-
[[Category: Roy, R]]
+
[[Category: Roy R]]
-
[[Category: Saucier, C]]
+
[[Category: Saucier C]]
-
[[Category: Varrot, A]]
+
[[Category: Varrot A]]
-
[[Category: Glycomimetic]]
+
-
[[Category: Sugar binding protein]]
+
-
[[Category: Sugar-binding protein]]
+

Current revision

Structure of the PAIL lectin from Pseudomonas aeruginosa in complex with 2-Naphtyl-1-thio-beta-D-galactopyranoside

PDB ID 4a6s

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4a6s"
Personal tools