4q2l

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==Atomic Resolution Structure of the E. coli YajR Transporter YAM Domain==
==Atomic Resolution Structure of the E. coli YajR Transporter YAM Domain==
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<StructureSection load='4q2l' size='340' side='right'caption='[[4q2l]], [[Resolution|resolution]] 1.07&Aring;' scene=''>
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<StructureSection load='4q2l' size='340' side='right'caption='[[4q2l]]' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[4q2l]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Q2L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4Q2L FirstGlance]. <br>
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Q2L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4Q2L FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4q2l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4q2l OCA], [https://pdbe.org/4q2l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4q2l RCSB], [https://www.ebi.ac.uk/pdbsum/4q2l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4q2l ProSAT]</span></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3dxs|3dxs]], [[4q2m|4q2m]]</div></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4q2l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4q2l OCA], [https://pdbe.org/4q2l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4q2l RCSB], [https://www.ebi.ac.uk/pdbsum/4q2l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4q2l ProSAT]</span></td></tr>
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</table>
</table>
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<div style="background-color:#fffaf0;">
 
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== Publication Abstract from PubMed ==
 
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YajR is an Escherichia coli transporter that belongs to the major facilitator superfamily. Unlike most MFS transporters, YajR contains a carboxyl terminal, cytosolic domain of 67 amino acid residues termed YAM domain. Although it is speculated that the function of this small soluble domain is to regulate the conformational change of the 12-helix transmembrane domain, its precise regulatory role remains unclear. Here, we report the crystal structure of the YAM domain at 1.07-A resolution, along with its structure determined using nuclear magnetic resonance. Detailed analysis of the high resolution structure revealed a symmetrical dimer in which a belt of well-ordered poly-pentagonal water molecules is embedded. A mutagenesis experiment and a thermal stability assay were used to analyze the putative role of this dimerization in response to changes in halogen concentration.
 
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Atomic resolution structure of the E. coli YajR transporter YAM domain.,Jiang D, Zhao Y, Fan J, Liu X, Wu Y, Feng W, Zhang XC Biochem Biophys Res Commun. 2014 Jun 19. pii: S0006-291X(14)01127-9. doi:, 10.1016/j.bbrc.2014.06.053. PMID:24952155<ref>PMID:24952155</ref>
 
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
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</div>
 
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<div class="pdbe-citations 4q2l" style="background-color:#fffaf0;"></div>
 
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Zhang, X C]]
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[[Category: Zhang XC]]
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[[Category: Feredoxin fold]]
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[[Category: Transport protein]]
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[[Category: Transporter]]
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Revision as of 10:54, 31 August 2022

Atomic Resolution Structure of the E. coli YajR Transporter YAM Domain

PDB ID 4q2l

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