8awv

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'''Unreleased structure'''
 
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The entry 8awv is ON HOLD
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==Millisecond cryo-trapping by the spitrobot crystal plunger, Xylose Isomerase with Glucose at 500ms==
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<StructureSection load='8awv' size='340' side='right'caption='[[8awv]], [[Resolution|resolution]] 2.08&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[8awv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_rubiginosus Streptomyces rubiginosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8AWV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8AWV FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8awv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8awv OCA], [https://pdbe.org/8awv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8awv RCSB], [https://www.ebi.ac.uk/pdbsum/8awv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8awv ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/XYLA_STRRU XYLA_STRRU] Involved in D-xylose catabolism.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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We introduce the spitrobot, a protein crystal plunger, enabling reaction quenching via cryo-trapping with a time-resolution in the millisecond range. Protein crystals are mounted on canonical micromeshes on an electropneumatic piston, where the crystals are kept in a humidity and temperature-controlled environment, then reactions are initiated via the liquid application method (LAMA) and plunging into liquid nitrogen is initiated after an electronically set delay time to cryo-trap intermediate states. High-magnification images are automatically recorded before and after droplet deposition, prior to plunging. The SPINE-standard sample holder is directly plunged into a storage puck, enabling compatibility with high-throughput infrastructure. Here we demonstrate binding of glucose and 2,3-butanediol in microcrystals of xylose isomerase, and of avibactam and ampicillin in microcrystals of the extended spectrum beta-lactamase CTX-M-14. We also trap reaction intermediates and conformational changes in macroscopic crystals of tryptophan synthase to demonstrate that the spitrobot enables insight into catalytic events.
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Authors: Mehrabi, P., Sung, S., von Stetten, D., Prester, A., Hatton, C.E., Kleine-Doepke, S., Berkes, A., Gore, G., Leimkohl, J.P., Schikora, H., Kollewe, M., Rohde, H., Wilmanns, M., Tellkamp, F., Schulz, E.C.
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Millisecond cryo-trapping by the spitrobot crystal plunger simplifies time-resolved crystallography.,Mehrabi P, Sung S, von Stetten D, Prester A, Hatton CE, Kleine-Dopke S, Berkes A, Gore G, Leimkohl JP, Schikora H, Kollewe M, Rohde H, Wilmanns M, Tellkamp F, Schulz EC Nat Commun. 2023 Apr 25;14(1):2365. doi: 10.1038/s41467-023-37834-w. PMID:37185266<ref>PMID:37185266</ref>
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Description: Millisecond cryo-trapping by the spitrobot crystal plunger, Xylose Isomerase with Glucose at 500ms
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Mehrabi, P]]
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<div class="pdbe-citations 8awv" style="background-color:#fffaf0;"></div>
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[[Category: Gore, G]]
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== References ==
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[[Category: Sung, S]]
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<references/>
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[[Category: Rohde, H]]
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__TOC__
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[[Category: Kleine-Doepke, S]]
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</StructureSection>
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[[Category: Hatton, C.E]]
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[[Category: Large Structures]]
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[[Category: Leimkohl, J.P]]
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[[Category: Streptomyces rubiginosus]]
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[[Category: Wilmanns, M]]
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[[Category: Berkes A]]
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[[Category: Prester, A]]
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[[Category: Gore G]]
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[[Category: Von Stetten, D]]
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[[Category: Hatton CE]]
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[[Category: Tellkamp, F]]
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[[Category: Kleine-Doepke S]]
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[[Category: Kollewe, M]]
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[[Category: Kollewe M]]
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[[Category: Schikora, H]]
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[[Category: Leimkohl JP]]
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[[Category: Berkes, A]]
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[[Category: Mehrabi P]]
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[[Category: Schulz, E.C]]
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[[Category: Prester A]]
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[[Category: Rohde H]]
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[[Category: Schikora H]]
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[[Category: Schulz EC]]
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[[Category: Sung S]]
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[[Category: Tellkamp F]]
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[[Category: Wilmanns M]]
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[[Category: Von Stetten D]]

Revision as of 04:01, 25 May 2023

Millisecond cryo-trapping by the spitrobot crystal plunger, Xylose Isomerase with Glucose at 500ms

PDB ID 8awv

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