7wrk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (19:44, 29 May 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='7wrk' size='340' side='right'caption='[[7wrk]], [[Resolution|resolution]] 1.78&Aring;' scene=''>
<StructureSection load='7wrk' size='340' side='right'caption='[[7wrk]], [[Resolution|resolution]] 1.78&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[7wrk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7WRK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7WRK FirstGlance]. <br>
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7WRK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7WRK FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.78&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7wrk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7wrk OCA], [https://pdbe.org/7wrk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7wrk RCSB], [https://www.ebi.ac.uk/pdbsum/7wrk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7wrk ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7wrk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7wrk OCA], [https://pdbe.org/7wrk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7wrk RCSB], [https://www.ebi.ac.uk/pdbsum/7wrk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7wrk ProSAT]</span></td></tr>
</table>
</table>
-
== Function ==
 
-
[[https://www.uniprot.org/uniprot/Q5SH57_THET8 Q5SH57_THET8]]
 
-
<div style="background-color:#fffaf0;">
 
-
== Publication Abstract from PubMed ==
 
-
The crystal structure of an uncharacterized hypothetical protein, TTHA1873 from Thermus thermophilus, has been determined by X-ray crystallography to a resolution of 1.78 A using the single-wavelength anomalous dispersion method. The protein crystallized as a dimer in two space groups: P43212 and P6122. Structural analysis of the hypothetical protein revealed that the overall fold of TTHA1873 has a beta-sandwich jelly-roll topology with nine beta-strands. TTHA1873 is a dimeric metal-binding protein that binds to two Ca(2+) ions per chain, with one on the surface and the other stabilizing the dimeric interface of the two chains. A structural homology search indicates that the protein has moderate structural similarity to one domain of cell-surface proteins or agglutinin receptor proteins. Red blood cells showed visible agglutination at high concentrations of the hypothetical protein.
 
- 
-
Structure of the hypothetical protein TTHA1873 from Thermus thermophilus.,Yuvaraj I, Chaudhary SK, Jeyakanthan J, Sekar K Acta Crystallogr F Struct Biol Commun. 2022 Sep 1;78(Pt 9):338-346. doi:, 10.1107/S2053230X22008457. Epub 2022 Aug 30. PMID:36048084<ref>PMID:36048084</ref>
 
- 
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
-
</div>
 
-
<div class="pdbe-citations 7wrk" style="background-color:#fffaf0;"></div>
 
-
== References ==
 
-
<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Thermus thermophilus HB8]]
 
[[Category: Santosh KC]]
[[Category: Santosh KC]]
[[Category: Sekar K]]
[[Category: Sekar K]]
[[Category: Yuvaraj I]]
[[Category: Yuvaraj I]]

Current revision

Structure of hypothetical protein TTHA1873 from Thermus thermophilus

PDB ID 7wrk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools