8b38
From Proteopedia
(Difference between revisions)
m (Protected "8b38" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | '''Unreleased structure''' | ||
| - | + | ==Chaetoceros socialis forma radians RNA virus 1 full capsid atomic model== | |
| + | <StructureSection load='8b38' size='340' side='right'caption='[[8b38]], [[Resolution|resolution]] 3.00Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[8b38]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Chaetoceros_socialis_forma_radians_RNA_virus_1 Chaetoceros socialis forma radians RNA virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8B38 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8B38 FirstGlance]. <br> | ||
| + | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8b38 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8b38 OCA], [https://pdbe.org/8b38 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8b38 RCSB], [https://www.ebi.ac.uk/pdbsum/8b38 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8b38 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/B9A8E1_9VIRU B9A8E1_9VIRU] | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Marnaviridae viruses are abundant algal viruses that regulate the dynamics of algal blooms in aquatic environments. They employ a narrow host range because they merely lyse their algal host species. This host-specific lysis is thought to correspond to the unique receptor-binding mechanism of the Marnaviridae viruses. Here, we present the atomic structures of the full and empty capsids of Chaetoceros socialis forma radians RNA virus 1 built-in 3.0 A and 3.1 A cryo-electron microscopy maps. The empty capsid structure and the structural variability provide insights into its assembly and uncoating intermediates. In conjunction with the previously reported atomic model of the Chaetoceros tenuissimus RNA virus type II capsid, we have identified the common and diverse structural features of the VP1 surface between the Marnaviridae viruses. We have also tested the potential usage of AlphaFold2 for structural prediction of the VP1s and a subsequent structural phylogeny for classifying Marnaviridae viruses by their hosts. These findings will be crucial for inferring the host-specific receptor-binding mechanism in Marnaviridae viruses. | ||
| - | + | Structural Insights into Common and Host-Specific Receptor-Binding Mechanisms in Algal Picorna-like Viruses.,Wang H, Munke A, Li S, Tomaru Y, Okamoto K Viruses. 2022 Oct 27;14(11):2369. doi: 10.3390/v14112369. PMID:36366467<ref>PMID:36366467</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| - | [[Category: | + | <div class="pdbe-citations 8b38" style="background-color:#fffaf0;"></div> |
| - | [[Category: | + | == References == |
| - | [[Category: | + | <references/> |
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Chaetoceros socialis forma radians RNA virus 1]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Munke A]] | ||
| + | [[Category: Okamoto K]] | ||
| + | [[Category: Wang H]] | ||
Revision as of 10:14, 24 November 2022
Chaetoceros socialis forma radians RNA virus 1 full capsid atomic model
| |||||||||||
